ID A1VSX8_POLNA Unreviewed; 325 AA.
AC A1VSX8;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 27-MAR-2024, entry version 90.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM38756.1};
GN OrderedLocusNames=Pnap_3459 {ECO:0000313|EMBL:ABM38756.1};
OS Polaromonas naphthalenivorans (strain CJ2).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Polaromonas.
OX NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM38756.1, ECO:0000313|Proteomes:UP000000644};
RN [1] {ECO:0000313|Proteomes:UP000000644}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT tar-contaminated sediment, reveals physiological and metabolic versatility
RT and evolution through extensive horizontal gene transfer.";
RL Environ. Microbiol. 11:2253-2270(2009).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP000529; ABM38756.1; -; Genomic_DNA.
DR RefSeq; WP_011802827.1; NC_008781.1.
DR AlphaFoldDB; A1VSX8; -.
DR STRING; 365044.Pnap_3459; -.
DR KEGG; pna:Pnap_3459; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_4_1_4; -.
DR OrthoDB; 8715249at2; -.
DR Proteomes; UP000000644; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd05466; PBP2_LTTR_substrate; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF2; HTH-TYPE TRANSCRIPTIONAL REGULATOR YJIE; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000644};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..58
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
FT REGION 302..325
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 325 AA; 36038 MW; 6A5DEADADB91E138 CRC64;
METKWLEDFV SLAETRSFSR SAQLRHVTQP AFSRRIQALE AWAGTDLVDR SSYPTRLTPA
GQTLYSQSLE MLQGLQSTRA MLRGHNSAGQ DFIEFAVPHT LAFTFFPAWL SSLQSKFGPI
KSRLIALNVH DAVLRLTEGS CDLLISYHHD SQPFQLNADR YEMVLLGQEV LAPFVRADAS
GQPEHRLPGR AGQPLPYLGY ASGAYLGRMV DLILKQSSVP IHLDRVYETD MAEGLKAMAL
EGHGIAFLPL SAVKKEVRSR KLVSAGPGLE MTMDVRVYRE RPTARNTVKS HAQDLWTYLE
SQAAGKDKPA SRPGSPVVPR APPAR
//
