ID   A1XK84_ALLCE            Unreviewed;       852 AA.
AC   A1XK84;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   27-MAR-2024, entry version 34.
DE   RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE   Flags: Fragment;
GN   Name=rpoC2 {ECO:0000313|EMBL:ABD93790.1};
OS   Allium cepa (Onion).
OG   Plastid; Chloroplast {ECO:0000313|EMBL:ABD93790.1}.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Amaryllidaceae;
OC   Allioideae; Allieae; Allium.
OX   NCBI_TaxID=4679 {ECO:0000313|EMBL:ABD93790.1};
RN   [1] {ECO:0000313|EMBL:ABD93790.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Qiu Y.-L., Li L., Hendry T.A., Li R., Taylor D.W., Issa M.J., Ronen A.J.,
RA   Vekaria M.L., White A.M.;
RT   "Reconstructing the basal angiosperm phylogeny: evaluating information
RT   content of mitochondrial genes.";
RL   Taxon 55:837-856(2006).
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DR   EMBL; DQ407092; ABD93790.1; -; Genomic_DNA.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   CDD; cd02655; RNAP_beta'_C; 1.
DR   Gene3D; 1.10.150.390; -; 1.
DR   Gene3D; 1.10.1790.20; -; 1.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   PANTHER; PTHR48355; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   PANTHER; PTHR48355:SF2; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   4: Predicted;
KW   Chloroplast {ECO:0000313|EMBL:ABD93790.1};
KW   Plastid {ECO:0000313|EMBL:ABD93790.1};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          737..822
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ABD93790.1"
FT   NON_TER         852
FT                   /evidence="ECO:0000313|EMBL:ABD93790.1"
SQ   SEQUENCE   852 AA;  96923 MW;  0E01F942A43926C6 CRC64;
     EMHWSTNVYH APEYTYSNVH LLPKTSHLWL LAGSPRGSSI VSFSLHKDQD QIHFYSFSVD
     ERYISDFSIT NDQVRHKLLD PSVKKDREIF DYSRLDQIIR NRHLDFIYLS ILQENSDLLA
     KRRRNRFSIP LQYNPEGEKE LIPSFGISIE IPTNGILHRN SILAYFDDPX XRRNSSGITK
     YGTVEVDSIV KKEDLIEYRG VKEFSPKYKM KVDRFFFIPE EVHILPGSSY LMVRNNSIIE
     VDTQLALNTR SQVGGLVRVE IKKKXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXKKN
     SKESKILKNW IYVQRITPIK KKYFVLVRPV ITYEIADGIN LAKLFTQDLL QEKDNVQLRI
     VNYILYGNGK SIRGIFHTSI QLVRTCLVLN WDQEKNGSIE EVHASLVEVR ANDLIQNFIK
     IELVKSSLSY AEKRYDTAGS GLIPDNGLDC TNINPFFSKV KISVVTQHQA TIVTLLNQNK
     ALIILSSSNC SRVGPCPFNG SKYNITAKEL NPIILIRDLL GPLGTIVSKI VNFYSAYYLI
     THXQILVNKY WILDNLKATF QVLEVLKYCL IDENRRIYNP NPCNTIILNP SHLNWCFLHH
     NYCEETSTII SIGQFFCENL CLVKYGTHIK KSGQILIVHV DCLVIRSAKP YLATPGATVH
     GHYGETLSEG DTLVTFIYEK SRSGDISAGL PKVEQILEVR SXXXXXXXXX XXXXXXXXXX
     XXILGIPWGF LIGAELTIAQ SHISLVNKIQ RVYRSQGVQI HNRHLEIIVR QVTSKVLVSE
     DGMSNVFSPG ELIGLLRAER AGRALDEAIC YRAILLGITR ASLNTQSFIS EASFQETARV
     LAKAALRGRI DW
//