ID A3HSV9_9BACT Unreviewed; 828 AA.
AC A3HSV9;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:EAZ82927.1};
GN ORFNames=ALPR1_11940 {ECO:0000313|EMBL:EAZ82927.1};
OS Algoriphagus machipongonensis.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC Algoriphagus.
OX NCBI_TaxID=388413 {ECO:0000313|EMBL:EAZ82927.1, ECO:0000313|Proteomes:UP000003919};
RN [1] {ECO:0000313|EMBL:EAZ82927.1, ECO:0000313|Proteomes:UP000003919}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PR1 {ECO:0000313|EMBL:EAZ82927.1,
RC ECO:0000313|Proteomes:UP000003919};
RX PubMed=21183675; DOI=10.1128/JB.01421-10;
RA Alegado R.A., Ferriera S., Nusbaum C., Young S.K., Zeng Q., Imamovic A.,
RA Fairclough S.R., King N.;
RT "Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a
RT colony-forming choanoflagellate.";
RL J. Bacteriol. 193:1485-1486(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAZ82927.1}.
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DR EMBL; AAXU02000001; EAZ82927.1; -; Genomic_DNA.
DR RefSeq; WP_008200806.1; NZ_CM001023.1.
DR AlphaFoldDB; A3HSV9; -.
DR STRING; 388413.ALPR1_11940; -.
DR eggNOG; COG1643; Bacteria.
DR HOGENOM; CLU_001832_5_6_10; -.
DR OrthoDB; 9808833at2; -.
DR Proteomes; UP000003919; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17990; DEXHc_HrpB; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR010225; HrpB.
DR InterPro; IPR049614; HrpB_DEXH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013689; RNA_helicase_ATP-dep_HrpB_C.
DR NCBIfam; TIGR01970; DEAH_box_HrpB; 1.
DR PANTHER; PTHR43519; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR PANTHER; PTHR43519:SF1; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08482; HrpB_C; 1.
DR PIRSF; PIRSF005496; ATP_hel_hrpB; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:EAZ82927.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000003919}.
FT DOMAIN 22..186
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 208..375
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 828 AA; 92920 MW; 99B8516E4D9D0C50 CRC64;
MLENFDPLSF DLPVAEIIPQ VKSHLSTENS LIIQAPPGAG KSTLLPLTLL DEPWLAGKKI
IMLEPRRLAT KTIAQRMAGM TDTKLGDLIG YRIRFESAIS SNTRLEVITE GILTRMLHSD
NALEDVGLVI FDEFHERNLH SEVALALCRE VQQVLRPDLR ILLMSATIDA NLLSGLLKSK
VIESKGRQFP VEVNYLNEAD EYAIGEDTAR QIIPLTKLHS GDFLVFLPGQ GEIRKAQEIL
RKALPGDLVL PLYGQLSPGD QNRAILPHPS GKRKIVLSTD IAETSLTIEG VTVVVDSGFA
KSSRFDPRSG LSRLVLHRIS QDSADQRSGR AGRLTAGHSY RLWTKAIQNQ LNEYRTPELM
EADLTGLVLD MKAWGKQDIR SMTWLTPPPS GTLALAEKTL ESIEAIVEGE LTPHGKEIHQ
LPTHPRIAHM LINAEEIDQL GLATDIAAIL DERDPLGPDA GVDLNLRIEA LRRFRQHNVS
IPRIKKIEKM AASYRRMFSI QPENGPVDPW QTGLLLAYAY PERIAAARPG NNAQFQLANG
KIAQIGHRDD LAHESWLAVA HVDARDGMGK IWMAAPINPK DLAPMLKTKE VLKWDRKKGG
LQAHSEIRIG SIILGTRPLA KYSDGDVTDA ILEAIREEGE YLLDFNDEVE QLILRVQSLK
QWNPDQNWPD WSVASLCEKP ESWIEPYLAG IQKNDDFKKL NLSQILLHSL DFEQQKDLER
LAPSRLEVPS GSKIKIEYRK DEIPLLAVRL QELFGLLETP KVNNGKVNVL IEMLSPGYKP
VQLTQDLKSF WQNGYFEVKK ELKRRYPKHE WPEDPIGAEA VRGVKRRS
//
