ID A3QA80_SHELP Unreviewed; 305 AA.
AC A3QA80;
DT 17-APR-2007, integrated into UniProtKB/TrEMBL.
DT 17-APR-2007, sequence version 1.
DT 27-MAR-2024, entry version 104.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABO22378.1};
GN OrderedLocusNames=Shew_0506 {ECO:0000313|EMBL:ABO22378.1};
OS Shewanella loihica (strain ATCC BAA-1088 / PV-4).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=323850 {ECO:0000313|EMBL:ABO22378.1, ECO:0000313|Proteomes:UP000001558};
RN [1] {ECO:0000313|EMBL:ABO22378.1, ECO:0000313|Proteomes:UP000001558}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1088 / PV-4 {ECO:0000313|Proteomes:UP000001558};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G.,
RA Fredrickson J., Tiedje J., Richardson P.;
RT "Complete sequence of Shewanella loihica PV-4.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP000606; ABO22378.1; -; Genomic_DNA.
DR RefSeq; WP_011864312.1; NC_009092.1.
DR AlphaFoldDB; A3QA80; -.
DR STRING; 323850.Shew_0506; -.
DR KEGG; slo:Shew_0506; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_4_6; -.
DR OrthoDB; 9786526at2; -.
DR Proteomes; UP000001558; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08422; PBP2_CrgA_like; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF21; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000001558}.
FT DOMAIN 1..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 305 AA; 34678 MW; ECB81FFA01A30A28 CRC64;
MYHLKDLQLA IRIADLHSIS AAARELGMTP ASASAALQRL EHKLNCQLFA RSTRNMQLTE
EGQAFIDTGR QALSLLQGAS DALADKRGEL RGELRIALPS DLGRNRVRAW LDELTAEAPE
LTLRLYFGDQ LDDLIAQNVH LALRYGELQD SSLMRRQLAR MHRVTVASPV YLARHGRPSH
PQQLSQHKIL LLNRGNTPWH KWRFAYKQQP LEVELTGSKS CNDGAVIKEW ALAGEGIAYK
SWFDVAQEVT EGRLELLLVD YLADPIPLQL TYLQTEYPSH KVRTCIEFLK EKCQAFDSQY
PLLRR
//
