ID A3QE18_SHELP Unreviewed; 790 AA.
AC A3QE18;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 27-MAR-2024, entry version 91.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with GAF sensor {ECO:0000313|EMBL:ABO23716.1};
GN OrderedLocusNames=Shew_1850 {ECO:0000313|EMBL:ABO23716.1};
OS Shewanella loihica (strain ATCC BAA-1088 / PV-4).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=323850 {ECO:0000313|EMBL:ABO23716.1, ECO:0000313|Proteomes:UP000001558};
RN [1] {ECO:0000313|EMBL:ABO23716.1, ECO:0000313|Proteomes:UP000001558}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1088 / PV-4 {ECO:0000313|Proteomes:UP000001558};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G.,
RA Fredrickson J., Tiedje J., Richardson P.;
RT "Complete sequence of Shewanella loihica PV-4.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000606; ABO23716.1; -; Genomic_DNA.
DR RefSeq; WP_011865648.1; NC_009092.1.
DR AlphaFoldDB; A3QE18; -.
DR STRING; 323850.Shew_1850; -.
DR KEGG; slo:Shew_1850; -.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_000445_70_20_6; -.
DR OrthoDB; 9804951at2; -.
DR Proteomes; UP000001558; Chromosome.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.450.40; -; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF85; CYCLIC DI-GMP PHOSPHODIESTERASE PDEK-RELATED; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00065; GAF; 2.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001558}.
FT DOMAIN 395..528
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 536..787
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 790 AA; 87392 MW; 1033CCAD983126A0 CRC64;
MPAKVPLQDV DAKYLKIISE FAIDMLSLSG VDEILWHLAQ NVVSQLGFDD VVVYLLDPAR
GVLMQKASFG DKNPSGHEIL APIELKLGEG VVGTVAKTKQ PLNVTDTRLF PNYIVDDAPR
LSELAVPMLM EGEVIGVIDT EHPKKNFYTP HHERILFALA SIAALKIHRA NNLVTLQKRV
AELEYASKIQ DTLFAIAEII FETDSIKAFY QKLHTCIARL LKADNFYVAL LSDDGQTLHF
PYHVDQYDHL AEDAEQPLLP TRLGITGYAL LKNRPLLAHE GQIQALVDQG EIVINGAMPT
AWLGVPFGDE AFRGIVVVQS YHGDYRYSEA DQQLLVFTAK HIRNAISRMK LKANLTEMAL
YDGLTGLPNR TLFIDRLNQA IAKLNDACND AASAAGVGLV LLDIDHFKAV NDTYGHHLGD
ELLKVFAERI HAAIASQDTF CRLGGDQFGL LLVDINSEEQ CLERVEALRE QMQAVLDLGG
ISLTLSVSMG LVTCFSPGMQ VTDLLRMGDQ SLLRAKLMGR HRLCVFTSGE QAELQEAQIC
QAFQQAADQG ELYFSFQPQY RLKDGKLLGA EALLRWQHPR LGTISPRRLL APLRRQGALE
LVDAVVAKLI LAHLKRYHGD YPEGFRLSVN IACDGCALFD ALGRMAGEGI ELASYLGIEI
PESSLGASFE AVVSCIARAK SLGVLVSLDD VGASHATFKY LQEFRFNRLK IAQGLISPME
MAYDNQVILE TIINLASTLN IDTLAQGIET REQYQTMQAL GCDYGQGEFM NPSVSEEKLL
LMLTESHLYR
//
