ID A4YL25_BRASO Unreviewed; 771 AA.
AC A4YL25;
DT 29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 90.
DE SubName: Full=Putative transcriptional accessory protein containing S1 RNA-binding domain {ECO:0000313|EMBL:CAL74601.1};
GN OrderedLocusNames=BRADO0672 {ECO:0000313|EMBL:CAL74601.1};
OS Bradyrhizobium sp. (strain ORS 278).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=114615 {ECO:0000313|EMBL:CAL74601.1, ECO:0000313|Proteomes:UP000001994};
RN [1] {ECO:0000313|EMBL:CAL74601.1, ECO:0000313|Proteomes:UP000001994}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ORS 278 {ECO:0000313|Proteomes:UP000001994};
RX PubMed=17540897; DOI=10.1126/science.1139548;
RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C.,
RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L.,
RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z.,
RA Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., Saunders E.,
RA Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G.,
RA Emerich D., Vermeglio A., Medigue C., Sadowsky M.;
RT "Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia.";
RL Science 316:1307-1312(2007).
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DR EMBL; CU234118; CAL74601.1; -; Genomic_DNA.
DR RefSeq; WP_011923863.1; NC_009445.1.
DR AlphaFoldDB; A4YL25; -.
DR STRING; 114615.BRADO0672; -.
DR KEGG; bra:BRADO0672; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_5; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000001994; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00278; HhH1; 2.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Reference proteome {ECO:0000313|Proteomes:UP000001994}.
FT DOMAIN 652..721
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 726..757
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 771 AA; 84607 MW; D9FCDF51F3086A53 CRC64;
MSNFASIIAA ELSVRDAQVQ AAIDLLDGGA TVPFIARYRK EATGMLDDTQ LRTLEERLRY
LREMDARRTA IIESIKSQGK MTPEIELALA TADTKARLED IYLPFKEKRR TKAQIAKEAG
LEPLADMLIG DPMKNPEDEA KAFIKKDGDN PVKDVKAALD GARAILVERF AEHADLVGSL
REEMWTRGAV KSSVRHGKKT EGAKFADYFD FSEPFTKLPS HRILAMLRGE KEEILQLDFG
DGEPEDSKDP SLYENRIAVT FGISRQGRPA DQFLSDSVRW AWRTRIKTSL ALDVRMRLWQ
EAEKEAVRVF AANLRDLLLA APAGGRATLG LDPGFRTGVK VAVIDRTGKF VDHATIYPHE
PQRQWNESML TLAQLCIKHR IELVAIGNGT ASRETEKLVT DLMKLKPDLK LTKAIVSEAG
ASVYSASEFA AKEFPNLDVS IRGAVSIARR LQDPLGELVK VPPASIGVGQ YQHDLNQYEL
ARALDATVED CVNAVGVDLN TASAPLLARV SGIGETLAQN IVAHRDANGP FPTRDKLKDV
PRLGPKAFEQ CAGFLRIRDG DNPLDASGVH PEAYPVVKKI LEATKSDIKV LIGETKTLKA
LNPAKFADER FGVPTVTDII KELEKPGRDP RPEFKTATFQ EGVEKITDLK PGMILEATVT
NVAAFGAFAD IGVHQDGLIH ISAMSEKRIN DPREVVKPGQ VVKVKVLDVD VPRQRISLTL
RLSDPLPAKG EKRTSARPPA AARMTTREEK PSGGGAFAAA LAKAQERRKG A
//
