ID   A5AA45_SALTR            Unreviewed;        71 AA.
AC   A5AA45;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   13-SEP-2023, entry version 28.
DE   SubName: Full=MHC class II alpha chain {ECO:0000313|EMBL:CAK18649.1};
DE   Flags: Fragment;
GN   Name=DAA {ECO:0000313|EMBL:CAK18649.1};
OS   Salmo trutta (Brown trout).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC   Salmonidae; Salmoninae; Salmo.
OX   NCBI_TaxID=8032 {ECO:0000313|EMBL:CAK18649.1};
RN   [1] {ECO:0000313|EMBL:CAK18649.1}
RP   NUCLEOTIDE SEQUENCE.
RA   O'Farrell B., Coughlan J.P., Cross T.F.;
RT   "Comparative MH Class II (DAA) variation in Irish and Norwegian brown
RT   trout.";
RL   Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AM262784; CAK18649.1; -; Genomic_DNA.
DR   AlphaFoldDB; A5AA45; -.
DR   GO; GO:0042613; C:MHC class II protein complex; IEA:InterPro.
DR   GO; GO:0019882; P:antigen processing and presentation; IEA:InterPro.
DR   GO; GO:0006955; P:immune response; IEA:InterPro.
DR   InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR   InterPro; IPR014745; MHC_II_a/b_N.
DR   InterPro; IPR001003; MHC_II_a_N.
DR   Pfam; PF00993; MHC_II_alpha; 1.
DR   SMART; SM00920; MHC_II_alpha; 1.
DR   SUPFAM; SSF54452; MHC antigen-recognition domain; 1.
PE   4: Predicted;
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180}.
FT   DOMAIN          1..71
FT                   /note="MHC class II alpha chain N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00920"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:CAK18649.1"
FT   NON_TER         71
FT                   /evidence="ECO:0000313|EMBL:CAK18649.1"
SQ   SEQUENCE   71 AA;  7619 MW;  547517BF66CC5DDC CRC64;
     GCSDSDGVNM YGLDGEELWY ADFIKGEGVV ALPPFVDPLS FPGFYEQAVG SQGVCKANLA
     VDIKAYKNPE E
//