ID   A5B232_VITVI            Unreviewed;       902 AA.
AC   A5B232;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   27-MAR-2024, entry version 50.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAN67428.1};
GN   ORFNames=VITISV_004708 {ECO:0000313|EMBL:CAN67428.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN67428.1};
RN   [1] {ECO:0000313|EMBL:CAN67428.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA   Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA   Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA   Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA   Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA   Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA   Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA   Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT   vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
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DR   EMBL; AM443904; CAN67428.1; -; Genomic_DNA.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   CDD; cd09279; RNase_HI_like; 1.
DR   CDD; cd01647; RT_LTR; 1.
DR   Gene3D; 1.10.340.70; -; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR041588; Integrase_H2C2.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR000477; RT_dom.
DR   InterPro; IPR041577; RT_RNaseH_2.
DR   PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR   Pfam; PF17921; Integrase_H2C2; 1.
DR   Pfam; PF17919; RT_RNaseH_2; 1.
DR   Pfam; PF00665; rve; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS50878; RT_POL; 1.
PE   4: Predicted;
FT   DOMAIN          46..225
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
FT   DOMAIN          637..796
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   REGION          490..523
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        490..508
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   902 AA;  102978 MW;  1900D199E17D6FD9 CRC64;
     MKGIHPSIXS HKLNILPXAR PVRQKVKRFH PBRQKIIRDE IXKLLEAGFI REVEYXDWLA
     NVMVVPKKEG KWRVCVDYTN LNNACPKDSF XLPRIDQIVD STTGXGMLSF LDAFSGYHXI
     PMSPXDEEKT AFITPHGLYC YKVMPFGLKN AGATYQRLMT KIFKXXVXRT VEVYIDDIVV
     KSKTQEEHVL HLQEVFHLLR RYDMKLNPFK CVFGVGAGKF LGFMVSQRGI EVSPDQVKAV
     METPPPKSKK ELQRLTGKLS AFEKIKHCLM QPPILSSPLP EEKLYMYLAV SEWAISAVLF
     RCPSPKEQKS IYYVSRALAD RIWNRVPTQV VHKGQVMADF VLEYPRRPIQ HKESSEKEWW
     TLRVNGASRS SGSGVGILLQ SPTGEHLEQA IRLGFPASNN EAEYEAILSG LDLVLALSVS
     KLLKEYEAKD VRMTRYLTKL RDTLQRFTEW PIEKIKQTEN GRADALTGIA ASLPIKEAIF
     LPIHPSRQPR LDGRHYKVPP DRHSTRKAQV GTQDPSSKRP FHPDRGALIQ TVLHRSSGCF
     FIKESGENAF LHEPLAISHD GAKWRIHKLQ FRSSGAFRMT VQKFRMVMRN HFVTISLVIN
     YWPTMKKDAA TYVKKCDKCQ RHAPIPHMPS ETLKPISDPW PFAQWGMDIV GPLPAATVQK
     KFLLVATDYF SKWVEAEAYA NIKDKYVTKF VWKNIVCRFR IPQTIIANNG PQFDSIAFRN
     FCSELNIWNS YSTPRYPQSN GQAEATNKTL ITVLKKRLEQ AKGKWVEELL GILWAYRTIP
     GRPTGNTPFA LAYGMDVVIP TEIGLPTIQT EAGRQDDANA EETVSIRMTD YQQRAAAHYN
     RKVRPKSFKS GMLVLRKVFE NIAETRVGKF QANWEDPYIV SKTSESGAYH LQKLDGTPLL
     RP
//