ID   A5C125_VITVI            Unreviewed;       582 AA.
AC   A5C125;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   27-MAR-2024, entry version 53.
DE   RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
GN   ORFNames=VITISV_011970 {ECO:0000313|EMBL:CAN68520.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN68520.1};
RN   [1] {ECO:0000313|EMBL:CAN68520.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA   Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA   Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA   Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA   Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA   Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA   Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA   Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT   vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
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DR   EMBL; AM478376; CAN68520.1; -; Genomic_DNA.
DR   AlphaFoldDB; A5C125; -.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR025314; DUF4219.
DR   InterPro; IPR025724; GAG-pre-integrase_dom.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   PANTHER; PTHR35317:SF11; GAG-POL POLYPROTEIN; 1.
DR   PANTHER; PTHR35317; OS04G0629600 PROTEIN; 1.
DR   Pfam; PF13961; DUF4219; 1.
DR   Pfam; PF13976; gag_pre-integrs; 1.
DR   Pfam; PF14223; Retrotran_gag_2; 1.
DR   SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT   DOMAIN          245..261
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50158"
SQ   SEQUENCE   582 AA;  66731 MW;  A8C7B33FD9835381 CRC64;
     MEESSLTVAP SVLDGDNYET WAVRMTVHLQ ALDVWEAVEE NYEVPPLGAN PTFAAVSPSI
     FIKIMKIDLA AEIWEYLKEE YKGDERIKNM QVMNLIREFE MKKMRESDAV KDYATQLLSI
     ADKVRLLGKE FSNEKIVQKI LVTLPEKYEA TISSLENSKD LSTISLTELL HSLEAVEQRR
     LMRQGDIAEG AFQARMHKNA GHKNGKVNNN KSCGNNQKNG VFPPCPHCKK TNHSPQKCWW
     RPDVKCNKCG KQGHVERICK NQQQEETSAA VDYCQEEQLF AATCFANKST SKSWLVDSGC
     TNHMTNNQDL FRELDRTIIS KVRIGNGEYI PVKGKGTVAI ESQTGLKLIY DVLFVPDIDQ
     NLLSVGQLVE KEFKVYFEDR NCIIKDAEGK EVFNIKMKGK SFTLNLLEDE HTAILQQDST
     TMFWDRRVEH FHHDDVLYMK KNQIAEGLPD LEKDLPICAT CQYGKQTKLP FPKKISWTAT
     QKLQLVHTDV GGSQKMPSLK WNANNVHQLT APYNPQQNGM TRCLLHEKYL PKKFWAKIAS
     RTVYFLNILP TKVLKKQTPF EVWFECLRTR LGVCIYEVKE EC
//