ID   A5C9M0_VITVI            Unreviewed;       977 AA.
AC   A5C9M0;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   27-MAR-2024, entry version 52.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAN84122.1};
GN   ORFNames=VITISV_005635 {ECO:0000313|EMBL:CAN84122.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CAN84122.1};
RN   [1] {ECO:0000313|EMBL:CAN84122.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D.,
RA   Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D.,
RA   Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.,
RA   Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N.,
RA   Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A.,
RA   Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T.,
RA   Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
RA   Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J.,
RA   Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P.,
RA   Gutin A., Van de Peer Y., Salamini F., Viola R.;
RT   "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis
RT   vinifera L.): coping with a highly heterozygous genome.";
RL   PLoS ONE 2:e1326-e1326(2007).
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DR   EMBL; AM487132; CAN84122.1; -; Genomic_DNA.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   CDD; cd09279; RNase_HI_like; 1.
DR   CDD; cd01647; RT_LTR; 1.
DR   Gene3D; 1.10.340.70; -; 1.
DR   Gene3D; 3.30.70.270; -; 3.
DR   Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR041588; Integrase_H2C2.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR000477; RT_dom.
DR   InterPro; IPR041577; RT_RNaseH_2.
DR   PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR   Pfam; PF17921; Integrase_H2C2; 1.
DR   Pfam; PF17919; RT_RNaseH_2; 1.
DR   Pfam; PF00665; rve; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   Pfam; PF13456; RVT_3; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS50879; RNASE_H_1; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723}.
FT   DOMAIN          400..529
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|PROSITE:PS50879"
FT   DOMAIN          689..848
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   977 AA;  110883 MW;  17E30B1631A3D19E CRC64;
     MKGIHPSIAS HKLNVFPAAR PIRQKIRRFH PDRQRVIQDE INKLLEAXFI REVSYPDWLA
     NVVVVPKKEG KWRVCVDYTN LNNACPKDSF PLPRIDQIVD STSGQGMLSF LDAFSGYHQI
     PMVYIDDIVV KSKTREQHIL HLQEVFHLLR RYGMKLNPSK CAFGVSAGKF LGFMVSQRGI
     EVSPDQVKAV METPPPRNKK ELQRLTGKLV ALGRFIARFT DELRPFFLAI RKAGTHGWTD
     NCQNALERIK HYLVHPPILS SPIPKEKLYM YLAVSEWAIS AVLFRCPSPK EQRPVYYVSR
     ALADVETRYS KMELTALALR SAAQKLRPYF QAHPVIVLTD QPLRSILHKP DLTGXMLQWA
     IELSEFGIEF QPRLSKKGQV MADFVLEYSR RPNQHHESSE QEWWTLRVDG ASRSSGSGVG
     LLLQSPTGEH LEQAIRLGFS ASNNEAEYEA ILSXLDLALA LSVSKLRIYS DSQLVVRHVQ
     KEYEAKDSRM ARYLAKVRST LQQFTEWTIE KIRRADNRRA DALAXIAXSL PIKEAILLPI
     HVQANPSVTE YSTCNTIEAN QTDHQEWTHD IAEYLRTGTL PEDPKQAHKI RVQAARFTLI
     GGHLYKRSFT GPYLRCLGHS EAQYVLAELH XGICGNHTGG RSLAHRAHSQ GYYWPTMKKD
     AAAYVQKCDK CQRYAPIPRM PSAALKSVSG PWPFAQWGMD IVGPLPAAPA QKKFLLVATD
     YFSKWVEXEA YASIKDKDVT KFVWKNIVCR FGIPQIIIAD NGPQFDSIAF RNFCSELNIR
     NSYSTPRYPQ SNGQAEATNK TLINALKKRL EQAKGKWVEE LPGVLWAYRT TPGRPTGNTP
     FALTYGMDAV IPTEIGLPTT RTDAAKQEBA NTELGRNLDW ADEVRESAXI RMADYQQRAS
     AHYNRKVKPR NFKNGTLVLR KVFENTAEVG AGKFQANWEG PYIVSKANEN GAYHLQKLDG
     TPLLRPWNVS NLKQYYQ
//