ID A5DWF3_LODEL Unreviewed; 414 AA.
AC A5DWF3;
DT 12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT 12-JUN-2007, sequence version 1.
DT 24-JAN-2024, entry version 73.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=LELG_01689 {ECO:0000313|EMBL:EDK43511.1};
OS Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC
OS 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade;
OC Lodderomyces.
OX NCBI_TaxID=379508 {ECO:0000313|EMBL:EDK43511.1, ECO:0000313|Proteomes:UP000001996};
RN [1] {ECO:0000313|EMBL:EDK43511.1, ECO:0000313|Proteomes:UP000001996}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 11503 / BCRC 21390 / CBS 2605 / JCM 1781 / NBRC 1676 /
RC NRRL YB-4239 {ECO:0000313|Proteomes:UP000001996};
RX PubMed=19465905; DOI=10.1038/nature08064;
RA Butler G., Rasmussen M.D., Lin M.F., Santos M.A., Sakthikumar S.,
RA Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., Agrafioti I.,
RA Arnaud M.B., Bates S., Brown A.J., Brunke S., Costanzo M.C.,
RA Fitzpatrick D.A., de Groot P.W., Harris D., Hoyer L.L., Hube B., Klis F.M.,
RA Kodira C., Lennard N., Logue M.E., Martin R., Neiman A.M., Nikolaou E.,
RA Quail M.A., Quinn J., Santos M.C., Schmitzberger F.F., Sherlock G.,
RA Shah P., Silverstein K.A., Skrzypek M.S., Soll D., Staggs R.,
RA Stansfield I., Stumpf M.P., Sudbery P.E., Srikantha T., Zeng Q., Berman J.,
RA Berriman M., Heitman J., Gow N.A., Lorenz M.C., Birren B.W., Kellis M.,
RA Cuomo C.A.;
RT "Evolution of pathogenicity and sexual reproduction in eight Candida
RT genomes.";
RL Nature 459:657-662(2009).
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DR EMBL; CH981525; EDK43511.1; -; Genomic_DNA.
DR RefSeq; XP_001526861.1; XM_001526811.1.
DR AlphaFoldDB; A5DWF3; -.
DR STRING; 379508.A5DWF3; -.
DR GeneID; 5234514; -.
DR KEGG; lel:LELG_01689; -.
DR VEuPathDB; FungiDB:LELG_01689; -.
DR eggNOG; KOG0126; Eukaryota.
DR HOGENOM; CLU_045495_2_2_1; -.
DR InParanoid; A5DWF3; -.
DR OMA; QFGEPVH; -.
DR OrthoDB; 168812at2759; -.
DR Proteomes; UP000001996; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR45880; RNA-BINDING MOTIF PROTEIN, X-LINKED 2; 1.
DR PANTHER; PTHR45880:SF1; RNA-BINDING MOTIF PROTEIN, X-LINKED 2; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001996};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 34..128
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 210..414
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 210..229
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 239..263
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 298..348
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 362..414
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 414 AA; 49275 MW; C87C2403128E59B7 CRC64;
MNKIRQINQI NQKELASKST TYKSSWHYDY RDTNYVYIGN IPYSITRNDL LVMFSQYGIP
THINLPLDTR TDNYNDGNDG KDEKNIAPKH RGFAFLKYAN FKSCILAIDN FNGVKVGGAN
VDEDRDRNRY GDRDRDRDRD ARYLIVDHTY YKLRYGERED DYLIDYDKVK KEMGFVSEKS
NQDFSRLKGM IEGKNPKLIE GNDFKVRQVE DNNKEDTIQK DLGDDMFGDD DDKYVNDDDE
FTDPMKSFIS EKKDNNKMQA HDHDDDDDDD DEEFADPMEQ LIRETRKHGS AGDRKRRRRS
RSKEDVEKER ERREKKHGSS RHKEDCARSP SRERGRSKNP RKDGRNRAEE EEEEEEEEEE
KEKEKEQKLP RSRDSRTPSR EPINRNNKRA RVEFRKESKD ESRTPSRERT NVRI
//
