ID A6M1H8_CLOB8 Unreviewed; 405 AA.
AC A6M1H8;
DT 24-JUL-2007, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2007, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE SubName: Full=Transcriptional regulator, PucR family {ECO:0000313|EMBL:ABR36458.1};
GN OrderedLocusNames=Cbei_4348 {ECO:0000313|EMBL:ABR36458.1};
OS Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium
OS acetobutylicum).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=290402 {ECO:0000313|EMBL:ABR36458.1, ECO:0000313|Proteomes:UP000000565};
RN [1] {ECO:0000313|EMBL:ABR36458.1, ECO:0000313|Proteomes:UP000000565}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Sims D., Brettin T., Bruce D., Tapia R., Brainard J., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Bennet G.,
RA Cann I., Chen J.-S., Contreras A.L., Jones D., Kashket E., Mitchell W.,
RA Stoddard S., Schwarz W., Qureshi N., Young M., Shi Z., Ezeji T., White B.,
RA Blaschek H., Richardson P.;
RT "Complete sequence of Clostridium beijerinckii NCIMB 8052.";
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABR36458.1, ECO:0000313|Proteomes:UP000000565}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RX PubMed=21962126; DOI=10.1186/1471-2164-12-479;
RA Wang Y., Li X., Mao Y., Blaschek H.P.;
RT "Single-nucleotide resolution analysis of the transcriptome structure of
RT Clostridium beijerinckii NCIMB 8052 using RNA-Seq.";
RL BMC Genomics 12:479-479(2011).
RN [3] {ECO:0000313|EMBL:ABR36458.1, ECO:0000313|Proteomes:UP000000565}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RX PubMed=22433311; DOI=10.1186/1471-2164-13-102;
RA Wang Y., Li X., Mao Y., Blaschek H.P.;
RT "Genome-wide dynamic transcriptional profiling in clostridium beijerinckii
RT NCIMB 8052 using single-nucleotide resolution RNA-Seq.";
RL BMC Genomics 13:102-102(2012).
CC -!- SIMILARITY: Belongs to the CdaR family.
CC {ECO:0000256|ARBA:ARBA00006754}.
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DR EMBL; CP000721; ABR36458.1; -; Genomic_DNA.
DR RefSeq; WP_012060505.1; NC_009617.1.
DR AlphaFoldDB; A6M1H8; -.
DR KEGG; cbe:Cbei_4348; -.
DR eggNOG; COG2508; Bacteria.
DR HOGENOM; CLU_017436_6_0_9; -.
DR Proteomes; UP000000565; Chromosome.
DR Gene3D; 1.10.10.2840; PucR C-terminal helix-turn-helix domain; 1.
DR InterPro; IPR041522; CdaR_GGDEF.
DR InterPro; IPR025736; PucR_C-HTH_dom.
DR InterPro; IPR042070; PucR_C-HTH_sf.
DR InterPro; IPR012914; PucR_dom.
DR PANTHER; PTHR33744; CARBOHYDRATE DIACID REGULATOR; 1.
DR PANTHER; PTHR33744:SF15; CARBOHYDRATE DIACID REGULATOR; 1.
DR Pfam; PF17853; GGDEF_2; 1.
DR Pfam; PF13556; HTH_30; 1.
DR Pfam; PF07905; PucR; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 7..130
FT /note="Purine catabolism PurC-like"
FT /evidence="ECO:0000259|Pfam:PF07905"
FT DOMAIN 154..289
FT /note="CdaR GGDEF-like"
FT /evidence="ECO:0000259|Pfam:PF17853"
FT DOMAIN 342..399
FT /note="PucR C-terminal helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF13556"
FT COILED 236..294
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 405 AA; 45573 MW; 62431047FD337F8D CRC64;
MSISVKDILK LDSLRKINLV GGEGGLEKSI EWIYVAECFE NPLEGIKWLQ GGEIIFITGV
GIRENEGLLL DFIKGISEKN GSGLIVNIGP YIRNVSEEAI KLANELEIPL FTLPWEVKLV
EVSREISNAI ILSRIEENSL SHFLSNILFG DGELEGDAIQ KAAYFGYNLS GGCCICVIDI
DGFERYLKLK NLGDEKSISK IKINFRKVVQ DILDKHALKV PIIDKDDAVI FFIRSEENCM
NRLDKALKEI QLATKNRMDG MSVSVGIGNS YKDLKMMKQS LNEAELAIDS AKCQGLDDTI
TRYKDIGIYS LLFSVENRSI LQNYFSEVLG PISGADNKDN NLIEILEMYL NENCNITVTA
EKLFLHRNTL KYKIKKIEEL LNCDLRNFND CIKVKIALDI GKILK
//
