ID A7M708_9BRAD Unreviewed; 277 AA.
AC A7M708;
DT 02-OCT-2007, integrated into UniProtKB/TrEMBL.
DT 02-OCT-2007, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|ARBA:ARBA00012895};
DE EC=5.6.2.2 {ECO:0000256|ARBA:ARBA00012895};
DE Flags: Fragment;
GN Name=gyrB {ECO:0000313|EMBL:BAF75804.1};
OS Bradyrhizobium canariense.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=255045 {ECO:0000313|EMBL:BAF75804.1};
RN [1] {ECO:0000313|EMBL:BAF75804.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=LMG 22265 {ECO:0000313|EMBL:BAF75804.1};
RA Islam M.S., Kawasaki H., Muramatsu Y., Nakagawa Y., Seki T.;
RT "Bradyrhizobium iriomotense sp. nov., isolated from a tumor-like root of
RT the legume Entada koshunensis from Iriomote island in Japan.";
RL Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP-dependent breakage, passage and rejoining of double-
CC stranded DNA.; EC=5.6.2.2; Evidence={ECO:0000256|ARBA:ARBA00000185};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- SIMILARITY: Belongs to the type II topoisomerase GyrB family.
CC {ECO:0000256|ARBA:ARBA00010708}.
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DR EMBL; AB353736; BAF75804.1; -; Genomic_DNA.
DR AlphaFoldDB; A7M708; -.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003918; F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity; IEA:UniProtKB-EC.
DR GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR CDD; cd16928; HATPase_GyrB-like; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR InterPro; IPR003594; HATPase_C.
DR InterPro; IPR036890; HATPase_C_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR001241; Topo_IIA.
DR InterPro; IPR013506; Topo_IIA_bsu_dom2.
DR PANTHER; PTHR45866:SF1; DNA GYRASE SUBUNIT B, MITOCHONDRIAL; 1.
DR PANTHER; PTHR45866; DNA GYRASE/TOPOISOMERASE SUBUNIT B; 1.
DR Pfam; PF00204; DNA_gyraseB; 1.
DR Pfam; PF02518; HATPase_c; 1.
DR PRINTS; PR00418; TPI2FAMILY.
DR SMART; SM00387; HATPase_c; 1.
DR SMART; SM00433; TOP2c; 1.
DR SUPFAM; SSF55874; ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Topoisomerase {ECO:0000256|ARBA:ARBA00023029}.
FT DOMAIN 1..139
FT /note="Histidine kinase/HSP90-like ATPase"
FT /evidence="ECO:0000259|SMART:SM00387"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:BAF75804.1"
FT NON_TER 277
FT /evidence="ECO:0000313|EMBL:BAF75804.1"
SQ SEQUENCE 277 AA; 30322 MW; FE28F15AAE16EA00 CRC64;
HMVYEVVDNA IDEALAGHAT RVDVILNADN SVTVRDDGRG IPVDIHKGEG ISAAEVIMTQ
LHAGGKFDQN SYKVSGGLHG VGVSVVNALS SKLGLRIWRD NKEHYIEFAH GDAVAPLKVV
GDAPGRRGTE VTFQASTETF KNIEYDFATL EHRLRELAFL NSGVNIALSD MRHAVEKREE
MHYSGGVEEF VKYLDRNKKA IVPAPIMVRA ESNGIGVEAA LWWNDSYHEN VLCFTNNIPQ
RDGGTHLAGF RGALTRQVNG YAEANAKKEK IALTGDD
//