ID A7MNQ7_CROS8 Unreviewed; 646 AA.
AC A7MNQ7;
DT 02-OCT-2007, integrated into UniProtKB/TrEMBL.
DT 02-OCT-2007, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE RecName: Full=RNase E specificity factor CsrD {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=ESA_03639 {ECO:0000313|EMBL:ABU78849.1};
OS Cronobacter sakazakii (strain ATCC BAA-894) (Enterobacter sakazakii).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Cronobacter.
OX NCBI_TaxID=290339 {ECO:0000313|EMBL:ABU78849.1, ECO:0000313|Proteomes:UP000000260};
RN [1] {ECO:0000313|EMBL:ABU78849.1, ECO:0000313|Proteomes:UP000000260}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-894 {ECO:0000313|EMBL:ABU78849.1,
RC ECO:0000313|Proteomes:UP000000260};
RX PubMed=20221447; DOI=10.1371/journal.pone.0009556;
RA Kucerova E., Clifton S.W., Xia X.Q., Long F., Porwollik S., Fulton L.,
RA Fronick C., Minx P., Kyung K., Warren W., Fulton R., Feng D., Wollam A.,
RA Shah N., Bhonagiri V., Nash W.E., Hallsworth-Pepin K., Wilson R.K.,
RA McClelland M., Forsythe S.J.;
RT "Genome sequence of Cronobacter sakazakii BAA-894 and comparative genomic
RT hybridization analysis with other Cronobacter species.";
RL PLoS ONE 5:E9556-E9556(2010).
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DR EMBL; CP000783; ABU78849.1; -; Genomic_DNA.
DR RefSeq; WP_012125989.1; NC_009778.1.
DR AlphaFoldDB; A7MNQ7; -.
DR KEGG; esa:ESA_03639; -.
DR PATRIC; fig|290339.8.peg.3243; -.
DR HOGENOM; CLU_028330_0_0_6; -.
DR Proteomes; UP000000260; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR033423; GAPES4.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF32; RNASE E SPECIFICITY FACTOR CSRD; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF17157; GAPES4; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000260};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..31
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 130..153
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 254..387
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 396..644
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 646 AA; 73162 MW; D0156372287EFA35 CRC64;
MRLTTKFSAF VTLLVGMAML VTLLGCSLSF FNAIQHKVTQ RVASVASIVD NELVSQSPQM
MQSRLDEIMV PLDIVRIEFA LGDKIVFSHT RPESYRESPF QTRARQLSVP LIKHPGMTLR
LTWQDPLANY YRSLLTTAPL TLAFALMVII IYISVRWIKR QLAGQELLEG RAVRILNGER
GANARGNIHE WPTHASSALD VLLTELQRAG EQRSRMDTLI RAFAAQDAKT GLSNRIFFDN
QLATLLEEQD NAVTHGVVMM IRLPDFDMLR DSWGKTAVEE YLFTLINMLS TFIMRYPGAL
LARYFRSDFA VLLPHRTLKE ADSIASQLLK AVGALPPTRM LDSSDMLHIG ICAWRSGQTT
EQVMEHAEVA TRNAVLQGGN GWAVYDSTLP DKGRGNVRWR TLIENALQRG GPRFYQKPAV
LRDGYVHHRE LMCRIFDGEE EVLAAEYMPM VQQFGLAEQY DRQLITRVLP FLRFWPDETL
ALPVTVESLI RPPFQRWLRD TLMQCEKSHR KRILFELAEA DVCQHLSRLQ PVVRLIRALG
LRIAVVQAGL TVVGTAWIKA LDVEIIKLHP GLVRDINKRT ENQLFVQSLV EACNGTQTRV
FAAGVRTKSE WQTLVERGVT GGQGDFFAAS QPLDTNVKKY SQRYSV
//
