ID A8IBB0_AZOC5 Unreviewed; 520 AA.
AC A8IBB0;
DT 04-DEC-2007, integrated into UniProtKB/TrEMBL.
DT 04-DEC-2007, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=Galactarate dehydratase {ECO:0000313|EMBL:BAF88634.1};
GN OrderedLocusNames=AZC_2636 {ECO:0000313|EMBL:BAF88634.1};
OS Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG
OS 6465 / NBRC 14845 / NCIMB 13405 / ORS 571).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Xanthobacteraceae; Azorhizobium.
OX NCBI_TaxID=438753 {ECO:0000313|EMBL:BAF88634.1, ECO:0000313|Proteomes:UP000000270};
RN [1] {ECO:0000313|EMBL:BAF88634.1, ECO:0000313|Proteomes:UP000000270}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 /
RC NCIMB 13405 / ORS 571 {ECO:0000313|Proteomes:UP000000270};
RX PubMed=17720818; DOI=10.1128/AEM.01514-07;
RA Suzuki S., Aono T., Lee KB., Suzuki T., Liu CT., Miwa H., Wakao S., Iki T.,
RA Oyaizu H.;
RT "Rhizobial factors required for stem nodule maturation and maintenance in
RT Sesbania rostrata-Azorhizobium caulinodans ORS571 symbiosis.";
RL Appl. Environ. Microbiol. 73:6650-6659(2007).
RN [2] {ECO:0000313|Proteomes:UP000000270}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 /
RC NCIMB 13405 / ORS 571 {ECO:0000313|Proteomes:UP000000270};
RA Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T.,
RA Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B.,
RA Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H.;
RT "Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium
RT caulinodans ORS571.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:BAF88634.1, ECO:0000313|Proteomes:UP000000270}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 /
RC NCIMB 13405 / ORS 571 {ECO:0000313|Proteomes:UP000000270};
RX PubMed=18522759; DOI=10.1186/1471-2164-9-271;
RA Lee KB., Backer P.D., Aono T., Liu CT., Suzuki S., Suzuki T., Kaneko T.,
RA Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B.,
RA Binnewies T.T., Ussery D.W., D'Haeze W., Herder J.D., Gevers D.,
RA Vereecke D., Holsters M., Oyaizu H.;
RT "The genome of the versatile nitrogen fixer Azorhizobium caulinodans
RT ORS571.";
RL BMC Genomics 9:271-271(2008).
RN [4] {ECO:0000313|EMBL:BAF88634.1, ECO:0000313|Proteomes:UP000000270}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 /
RC NCIMB 13405 / ORS 571 {ECO:0000313|Proteomes:UP000000270};
RX PubMed=19542345; DOI=10.1128/AEM.00398-09;
RA Tsukada S., Aono T., Akiba N., Lee KB., Liu CT., Toyazaki H., Oyaizu H.;
RT "Comparative genome-wide transcriptional profiling of Azorhizobium
RT caulinodans ORS571 grown under free-living and symbiotic conditions.";
RL Appl. Environ. Microbiol. 75:5037-5046(2009).
RN [5] {ECO:0000313|EMBL:BAF88634.1, ECO:0000313|Proteomes:UP000000270}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 /
RC NCIMB 13405 / ORS 571 {ECO:0000313|Proteomes:UP000000270};
RX PubMed=20382809; DOI=10.1128/AEM.00238-10;
RA Akiba N., Aono T., Toyazaki H., Sato S., Oyaizu H.;
RT "phrR-like gene praR of Azorhizobium caulinodans ORS571 is essential for
RT symbiosis with Sesbania rostrata and is involved in expression of reb
RT genes.";
RL Appl. Environ. Microbiol. 76:3475-3485(2010).
RN [6] {ECO:0000313|EMBL:BAF88634.1, ECO:0000313|Proteomes:UP000000270}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 /
RC NCIMB 13405 / ORS 571 {ECO:0000313|Proteomes:UP000000270};
RX PubMed=21571889; DOI=10.1128/AEM.02327-10;
RA Liu CT., Lee KB., Wang YS., Peng MH., Lee KT., Suzuki S., Suzuki T.,
RA Oyaizu H.;
RT "Involvement of the azorhizobial chromosome partition gene (parA) in the
RT onset of bacteroid differentiation during Sesbania rostrata stem nodule
RT development.";
RL Appl. Environ. Microbiol. 77:4371-4382(2011).
CC -!- SIMILARITY: Belongs to the UxaA family.
CC {ECO:0000256|ARBA:ARBA00010986}.
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DR EMBL; AP009384; BAF88634.1; -; Genomic_DNA.
DR AlphaFoldDB; A8IBB0; -.
DR STRING; 438753.AZC_2636; -.
DR KEGG; azc:AZC_2636; -.
DR eggNOG; COG2721; Bacteria.
DR HOGENOM; CLU_029189_0_0_5; -.
DR Proteomes; UP000000270; Chromosome.
DR GO; GO:0008867; F:galactarate dehydratase activity; IEA:InterPro.
DR GO; GO:0046392; P:galactarate catabolic process; IEA:InterPro.
DR CDD; cd11613; SAF_AH_GD; 1.
DR Gene3D; 2.30.130.110; -; 1.
DR InterPro; IPR017654; GarD-like.
DR InterPro; IPR048332; GD_AH_C.
DR InterPro; IPR007392; GD_AH_second.
DR InterPro; IPR013974; SAF.
DR InterPro; IPR044144; UxaA/GarD_SAF.
DR NCBIfam; TIGR03248; galactar-dH20; 1.
DR PANTHER; PTHR30536; ALTRONATE/GALACTARATE DEHYDRATASE; 1.
DR PANTHER; PTHR30536:SF1; GALACTARATE DEHYDRATASE (L-THREO-FORMING); 1.
DR Pfam; PF20629; GD_AH_C; 1.
DR Pfam; PF04295; GD_AH_second; 1.
DR Pfam; PF08666; SAF; 1.
DR SMART; SM00858; SAF; 1.
PE 3: Inferred from homology;
KW Lyase {ECO:0000256|ARBA:ARBA00023239};
KW Reference proteome {ECO:0000313|Proteomes:UP000000270}.
FT DOMAIN 28..98
FT /note="SAF"
FT /evidence="ECO:0000259|SMART:SM00858"
SQ SEQUENCE 520 AA; 55160 MW; 46C2E512D861EA39 CRC64;
MPDGRTQMTY QGPAGVETPR TIKVHESDNV AIVVNSFGLK PGTDLPDGTR LVEFVPQGHK
VALTDIADGA PILRYGEVIG RAIGDIPRGA WVEESRVAMP VPPDLSALEK ATRVPAPLPP
LEGYTFEGYR NPDGSVGTKN ILAISTSVQC VAGTLDFAIR RIREDLLPRY PNVDDVVAVT
HAYGCGVAIG APQSVVPIRT LQSLATHPNF GGEVMIVSLG CEKLQPERLL PEGKQGIVRL
QDEAFHGFDA MIGAILEMAE ARLEVLNRRK RETVPASELV VGLQCGGSDA FSGVTANPAL
GYAADLLVRA GATVMFSEVT EVRDAIHLLT PRAATPEVAD ALIREMAWYD DYLEQGGADR
SANPSPGNKK GGLANVVEKA LGSVAKSGSS TIAGVLAPGE KAKQKGLIFA ATPASDFVCG
TLQLASGMTL QVFSTGRGTP YGLSAAPVIK VATRTDLARR WHDLIDLDAG RIATGEATIE
DVGWDLFRLM LDVASGKVKP WSDKWGLFNA LTLFNPAPIT
//
