ID A8IG08_IBDV Unreviewed; 778 AA.
AC A8IG08;
DT 04-DEC-2007, integrated into UniProtKB/TrEMBL.
DT 04-DEC-2007, sequence version 1.
DT 08-NOV-2023, entry version 25.
DE SubName: Full=Polyprotein {ECO:0000313|EMBL:ABW04864.1};
DE Flags: Fragment;
OS Avian infectious bursal disease virus (IBDV) (Gumboro disease virus).
OC Viruses; Riboviria; Orthornavirae; Birnaviridae; Avibirnavirus;
OC Avibirnavirus gumboroense.
OX NCBI_TaxID=10995 {ECO:0000313|EMBL:ABW04864.1};
OH NCBI_TaxID=9031; Gallus gallus (Chicken).
OH NCBI_TaxID=9103; Meleagris gallopavo (Wild turkey).
RN [1] {ECO:0000313|EMBL:ABW04864.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=D78 {ECO:0000313|EMBL:ABW04864.1};
RX PubMed=18502466; DOI=10.1016/j.virol.2008.04.018;
RA Jackwood D.J., Sreedevi B., Lefever L.J., Sommer-Wagner S.E.;
RT "Studies on naturally occurring infectious bursal disease viruses suggest
RT that a single amino acid substitution at position 253 in VP2 increases
RT pathogenicity.";
RL Virology 377:110-116(2008).
CC -!- FUNCTION: Protease VP4 is a serine protease that cleaves the
CC polyprotein into its final products. Pre-VP2 is first partially
CC cleaved, and may be completely processed by VP4 upon capsid maturation.
CC {ECO:0000256|PROSITE-ProRule:PRU00881}.
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DR EMBL; EU162087; ABW04864.1; -; Genomic_RNA.
DR GO; GO:0008236; F:serine-type peptidase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.20; -; 1.
DR Gene3D; 6.10.250.1030; -; 1.
DR Gene3D; 2.60.120.660; icosahedral virus; 1.
DR InterPro; IPR002662; Birna_VP2.
DR InterPro; IPR025775; Birna_VP4_Prtase_dom.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF01766; Birna_VP2; 1.
DR Pfam; PF01768; Birna_VP4; 1.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS51548; BIRNAVIRUS_VP4_PRO; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|PROSITE-ProRule:PRU00881};
KW Protease {ECO:0000256|PROSITE-ProRule:PRU00881};
KW Serine protease {ECO:0000256|PROSITE-ProRule:PRU00881}.
FT DOMAIN 513..755
FT /note="Peptidase S50"
FT /evidence="ECO:0000259|PROSITE:PS51548"
FT ACT_SITE 652
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PIRSR:PIRSR602662-1,
FT ECO:0000256|PROSITE-ProRule:PRU00881"
FT ACT_SITE 692
FT /evidence="ECO:0000256|PIRSR:PIRSR602662-1,
FT ECO:0000256|PROSITE-ProRule:PRU00881"
FT NON_TER 778
FT /evidence="ECO:0000313|EMBL:ABW04864.1"
SQ SEQUENCE 778 AA; 83340 MW; F3984BA64E2F2B6E CRC64;
MTNLQDQTQQ IVPFIRSLLM PTTGPASIPD DTLEKHTLRS ETSTYNLTVG DTGSGLIVFF
PGFPGSIVGA HYTLQGNGNY KFDQMLLTAQ NLPASYNYCR LVSRSLTVRS STLPGGVYAL
NGTINAVTFQ GSLSELTDVS YNGLMSATAN INDKIGNVLV GEGVTVLSLP TSYDLGYVRL
GDPIPAIGLD PKMVATCDSS DRPRVYTITA ADDYQFSSQY QPGGVTITLF SANIDAITSL
SVGGELVFQT SVHGLVLGAT IYLIGFDGTT VITRAVAANN GLTTGTDNLM PFNLVIPTNE
ITQPITSIKL EIVTSKSGGQ AGDQMSWSAR GSLAVTIHGG NYPGALRPVT LVAYERVATG
SVVTVAGVSN FELIPNPELA KNLVTEYGRF DPGAMNYTKL ILSERDRLGI KTVWPTREYT
DFREYFMEVA DLNSPLKIAG AFGFKDIIRA IRRIAVPVVS TLFPPAAPLA HAIGEGVDYL
LGDEAQAASG TARAASGKAR AASGRIRQLT LAADKGYEVV ANLFQVPQNP VVDGILASPG
VLRGAHNLDC VLREGATLFP VVITTVEDAM TPKALNSKMF AVIEGVREDL QPPSQRGSFI
RTLSGHRVYG YAPDGVLPLE TGRDYTVVPI DDVWDDSIML SKDPIPPIVG NSGNLAIAYM
DVFRPKVPIH VAMTGALNAC GEIEKVSFRS TKLATAHRLG LKLAGPGAFD VNTGPNWATF
IKRFPHNPRD WDRLPYLNLP YLPPNAGRQY HLAMAASEFK ETPELESAVR AMEAAANV
//