ID A8XP28_CAEBR Unreviewed; 293 AA.
AC A8XP28;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=Protein CBG16435 {ECO:0000313|EMBL:CAP34404.1};
GN ORFNames=CBG16435 {ECO:0000313|EMBL:CAP34404.1,
GN ECO:0000313|WormBase:CBG16435}, CBG_16435
GN {ECO:0000313|EMBL:CAP34404.1};
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP34404.1, ECO:0000313|Proteomes:UP000008549};
RN [1] {ECO:0000313|EMBL:CAP34404.1, ECO:0000313|Proteomes:UP000008549}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000313|EMBL:CAP34404.1,
RC ECO:0000313|Proteomes:UP000008549};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SUBUNIT: The RNase H2 complex is a heterotrimer composed of the
CC catalytic subunit RNASEH2A and the non-catalytic subunits RNASEH2B and
CC RNASEH2C. {ECO:0000256|ARBA:ARBA00011277}.
CC -!- SIMILARITY: Belongs to the RNase H2 subunit B family.
CC {ECO:0000256|ARBA:ARBA00009823}.
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DR EMBL; HE601081; CAP34404.1; -; Genomic_DNA.
DR RefSeq; XP_002647137.1; XM_002647091.1.
DR AlphaFoldDB; A8XP28; -.
DR STRING; 6238.A8XP28; -.
DR EnsemblMetazoa; CBG16435.1; CBG16435.1; WBGene00036374.
DR GeneID; 8589136; -.
DR KEGG; cbr:CBG_16435; -.
DR CTD; 8589136; -.
DR WormBase; CBG16435; CBP18696; WBGene00036374; -.
DR eggNOG; KOG4705; Eukaryota.
DR HOGENOM; CLU_950702_0_0_1; -.
DR InParanoid; A8XP28; -.
DR OMA; MACDIVG; -.
DR OrthoDB; 38794at2759; -.
DR Proteomes; UP000008549; Unassembled WGS sequence.
DR GO; GO:0005654; C:nucleoplasm; IBA:GO_Central.
DR GO; GO:0032299; C:ribonuclease H2 complex; IBA:GO_Central.
DR GO; GO:0006401; P:RNA catabolic process; IBA:GO_Central.
DR CDD; cd09270; RNase_H2-B; 1.
DR Gene3D; 1.10.20.120; -; 1.
DR Gene3D; 2.20.25.530; -; 1.
DR InterPro; IPR040456; RNase_H2_suB.
DR InterPro; IPR019024; RNase_H2_suB_wHTH.
DR PANTHER; PTHR13383; RIBONUCLEASE H2 SUBUNIT B; 1.
DR PANTHER; PTHR13383:SF11; RIBONUCLEASE H2 SUBUNIT B; 1.
DR Pfam; PF09468; RNase_H2-Ydr279; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008549}.
FT DOMAIN 112..191
FT /note="Ribonuclease H2 subunit B wHTH"
FT /evidence="ECO:0000259|Pfam:PF09468"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 236..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 243..270
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 271..293
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 293 AA; 33643 MW; 320DBC0F707ED937 CRC64;
MPPKTRKAKK EDGVEQDEEV AEEILEETKP AKLPETDKGY ERKIVVAKAG SLPNSRIIKL
RHPKEGCALF RISEDNFDEI LAVNDGHRSF FYGESVIENG TIHVFAAYNP IFICLPYLEK
IESKFVEIDE ILKDEQYEDI KELAGNQRVL RTLEVICDVK DVLNVKLFRL NRQKMLEWIS
GKFESLKKQM ESDAHKSLLD CAEAYDRHVF TFLADFLSPE FSQIVKNHLK IQEATSSENV
DMSMKRRATE EDEFFEKEKP AAKKPKESIQ TKKLQAASKG TKSISSFFGK NTN
//
