ID A9NEP2_ACHLI Unreviewed; 818 AA.
AC A9NEP2;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 92.
DE RecName: Full=Large ribosomal subunit protein bL9 {ECO:0000256|HAMAP-Rule:MF_00503};
GN Name=rplI {ECO:0000256|HAMAP-Rule:MF_00503};
GN OrderedLocusNames=ACL_0196 {ECO:0000313|EMBL:ABX80822.1};
OS Acholeplasma laidlawii (strain PG-8A).
OC Bacteria; Mycoplasmatota; Mollicutes; Acholeplasmatales;
OC Acholeplasmataceae; Acholeplasma.
OX NCBI_TaxID=441768 {ECO:0000313|EMBL:ABX80822.1, ECO:0000313|Proteomes:UP000008558};
RN [1] {ECO:0000313|EMBL:ABX80822.1, ECO:0000313|Proteomes:UP000008558}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PG-8A {ECO:0000313|EMBL:ABX80822.1,
RC ECO:0000313|Proteomes:UP000008558};
RX PubMed=21784942; DOI=10.1128/JB.05059-11;
RA Lazarev V.N., Levitskii S.A., Basovskii Y.I., Chukin M.M., Akopian T.A.,
RA Vereshchagin V.V., Kostrjukova E.S., Kovaleva G.Y., Kazanov M.D.,
RA Malko D.B., Vitreschak A.G., Sernova N.V., Gelfand M.S., Demina I.A.,
RA Serebryakova M.V., Galyamina M.A., Vtyurin N.N., Rogov S.I., Alexeev D.G.,
RA Ladygina V.G., Govorun V.M.;
RT "Complete genome and proteome of Acholeplasma laidlawii.";
RL J. Bacteriol. 193:4943-4953(2011).
CC -!- FUNCTION: Binds to the 23S rRNA. {ECO:0000256|HAMAP-Rule:MF_00503}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL9 family.
CC {ECO:0000256|ARBA:ARBA00010605, ECO:0000256|HAMAP-Rule:MF_00503}.
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DR EMBL; CP000896; ABX80822.1; -; Genomic_DNA.
DR RefSeq; WP_012242153.1; NC_010163.1.
DR AlphaFoldDB; A9NEP2; -.
DR STRING; 441768.ACL_0196; -.
DR GeneID; 66293191; -.
DR KEGG; acl:ACL_0196; -.
DR eggNOG; COG0359; Bacteria.
DR eggNOG; COG3887; Bacteria.
DR HOGENOM; CLU_018278_0_0_14; -.
DR OrthoDB; 9759476at2; -.
DR Proteomes; UP000008558; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.10; inorganic pyrophosphatase (n-terminal core); 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 3.10.430.100; Ribosomal protein L9, C-terminal domain; 1.
DR Gene3D; 3.40.5.10; Ribosomal protein L9, N-terminal domain; 1.
DR HAMAP; MF_00503; Ribosomal_L9; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR049553; GdpP-like_PAS.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR009027; Ribosomal_bL9/RNase_H1_N.
DR InterPro; IPR020594; Ribosomal_bL9_bac/chp.
DR InterPro; IPR020069; Ribosomal_bL9_C.
DR InterPro; IPR036791; Ribosomal_bL9_C_sf.
DR InterPro; IPR020070; Ribosomal_bL9_N.
DR InterPro; IPR036935; Ribosomal_bL9_N_sf.
DR NCBIfam; TIGR00158; L9; 1.
DR PANTHER; PTHR47618; BIFUNCTIONAL OLIGORIBONUCLEASE AND PAP PHOSPHATASE NRNA; 1.
DR PANTHER; PTHR47618:SF2; CYCLIC-DI-AMP PHOSPHODIESTERASE GDPP; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF21370; GdpP_PAS; 1.
DR Pfam; PF03948; Ribosomal_L9_C; 1.
DR Pfam; PF01281; Ribosomal_L9_N; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
DR SUPFAM; SSF55658; L9 N-domain-like; 1.
DR SUPFAM; SSF55653; Ribosomal protein L9 C-domain; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008558};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_00503};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_00503};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_00503};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW Rule:MF_00503}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..25
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 37..59
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 185..313
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT COILED 705..739
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 818 AA; 92303 MW; E65ABC160FC335E4 CRC64;
MRKLINGILI TLWVIAFLVF TLVTFTEMFN QIPNIKFISY MTFIVITLLA VFVLILTIVN
NYKQYIKNLQ NRLARWSKLS PRVNQVGDDA FHELPIGILV LDEGLKEIKW VNQYAKVIFE
GRLIDRPVAE ISASLADYLL SDNKQPITIS VKDQKYEVLY KDSFQVIYLF NVTSRENVKL
EFIKNLPAIG ILNLDNFEDN MTNFDISEQT SIKGEYLSAI ADWVDEYNGY LKPYGDNRMV
MLIKRKRLED MMAKKFDILE HIRDISTNYG IRVTLSIGIA SWDLEYDELS DYAQNAIELA
EKRGGDQAVV NIQNQKIAYF GAKLESITRS SRTNARLAAQ MLGDTLNKAD QIYIMGHDQT
DLDSFGAMIG ALKMSLTTPD IAAYLIVDME KLDPTVTDVY NYLLSMNHLV TKHVITTQEA
LARKTKDTLL MILDTQNPQI VHSKELLDLK LKTAVIDHHR GNEASIKGDF SFIDPGASST
VELMMELFSF FPVEIQLDAP EASVMYGGII LDTNTFTYRT NARTFDVASK LKDYGADTMM
VKTWLRSDLN RIIKQNELLG KVEIFLDRFA IVKTEDVFND RTFIAQLSES LLEIKNVDAS
FTIVNFSDGT VGISARSFGA INVQLLMEEM GGGGHLSSAA TQIKDVSVND AYLQLKHILE
LEYGGDNTPM KVILLEDVKG KGKKDQVIEL AGGYANYLIS NKLAVFANEE NIKKLEDKKE
KEREEAAKYL ELMKKVASEI EGKSITLSIN VGADGKRFGS ITTKQIVEAF HEKHGVMIDK
KRLELANDIG SVGIYPVTVS LDKGVKATFE VNIIERRD
//
