ID A9QME5_9BILA Unreviewed; 371 AA.
AC A9QME5;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
OS Oscheius dolichura.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Rhabditinae;
OC Oscheius.
OX NCBI_TaxID=473156 {ECO:0000313|EMBL:ABV83204.1};
RN [1] {ECO:0000313|EMBL:ABV83204.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=JU460 {ECO:0000313|EMBL:ABV83204.1};
RX PubMed=18024125; DOI=10.1016/j.cub.2007.10.061;
RA Kiontke K., Barriere A., Kolotuev I., Podbilewicz B., Sommer R.,
RA Fitch D.H., Felix M.A.;
RT "Trends, stasis, and drift in the evolution of nematode vulva
RT development.";
RL Curr. Biol. 17:1925-1937(2007).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
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DR EMBL; EU153415; ABV83204.1; -; mRNA.
DR AlphaFoldDB; A9QME5; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd02584; RNAP_II_Rpb1_C; 1.
DR Gene3D; 3.30.1360.140; -; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR007075; RNA_pol_Rpb1_6.
DR InterPro; IPR007073; RNA_pol_Rpb1_7.
DR InterPro; IPR038593; RNA_pol_Rpb1_7_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF37; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 2: Evidence at transcript level;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..43
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04992"
FT DOMAIN 44..371
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
FT DOMAIN 128..261
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04990"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ABV83204.1"
FT NON_TER 371
FT /evidence="ECO:0000313|EMBL:ABV83204.1"
SQ SEQUENCE 371 AA; 41858 MW; 73D2BFBFBBCC9C43 CRC64;
ATLLMNILLR STLCAKKMAS THKLNQEAFE WLLGEIETRF KAAVAQPGEM VGALAAQSLG
EPATQMTLNT FHYAGVSAKN VTLGVPRLKE IINVSKQLKT PSLTVFLQGA AAKDAEKAKD
VLCKLEHTTL RKVTSNTAIY YDPDMKNTCI EEDDEWVSIF YEMPDFDPNR SSPWLLRLEL
DRRRMTDKKL NMEQIADKIH SGFGDDLNVI YTDDNADKLV FRIRITNQGD DKGEEEQIDK
MEDDMFLRCI ESNMLSDLTL QGIPSIAKVY MHKPNTDDKK RVVVTPEGDF KHIADWILET
DGTALLKVLS EPNIDPVRTT SNDICEIFEV LGIEAVRKSI EREMDNVISF DGSYVNYRHL
ALLCDVMTAK G
//
