ID   A9XW46_9ROSI            Unreviewed;      1273 AA.
AC   A9XW46;
DT   05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT   05-FEB-2008, sequence version 1.
DT   27-MAR-2024, entry version 49.
DE   RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE   Flags: Fragment;
GN   Name=rpoC2 {ECO:0000313|EMBL:ABV65706.1};
OS   Aphloia theiformis.
OG   Plastid; Chloroplast {ECO:0000313|EMBL:ABV65706.1}.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Crossosomatales; Aphloiaceae; Aphloia.
OX   NCBI_TaxID=112806 {ECO:0000313|EMBL:ABV65706.1};
RN   [1] {ECO:0000313|EMBL:ABV65706.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=19223592; DOI=10.1073/pnas.0813376106;
RA   Wang H., Moore M.J., Soltis P.S., Bell C.D., Brockington S.F.,
RA   Alexandre R., Davis C.C., Latvis M., Manchester S.R., Soltis D.E.;
RT   "Rosid radiation and the rapid rise of angiosperm-dominated forests.";
RL   Proc. Natl. Acad. Sci. U.S.A. 106:3853-3858(2009).
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DR   EMBL; EU002472; ABV65706.1; -; Genomic_DNA.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   CDD; cd02655; RNAP_beta'_C; 1.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.1790.20; -; 1.
DR   HAMAP; MF_01324; RNApol_bact_RpoC2; 1.
DR   InterPro; IPR012756; DNA-dir_RpoC2_beta_pp.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   NCBIfam; TIGR02388; rpoC2_cyan; 1.
DR   PANTHER; PTHR48355; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   PANTHER; PTHR48355:SF1; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 2.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   3: Inferred from homology;
KW   Chloroplast {ECO:0000313|EMBL:ABV65706.1};
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Plastid {ECO:0000313|EMBL:ABV65706.1};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          67..138
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF05000"
FT   DOMAIN          143..336
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
FT   DOMAIN          1167..1254
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ABV65706.1"
FT   NON_TER         1273
FT                   /evidence="ECO:0000313|EMBL:ABV65706.1"
SQ   SEQUENCE   1273 AA;  143957 MW;  B5A0B06B3A1DD29F CRC64;
     FGMAYTSHIL DQVKTLGFQQ ATATSISLGI DDLLTIPSKG WLVQDVEQQN FIFEKHHHYG
     NVHVIEKLRQ SVEIWYATSG YLRQEMNPNF RMTDPFNPVH IMSFSGARGN ASQVHQLVGM
     RGLMSDPQGQ MIDLPIQRNL REGLSLTEYI ISCYGARKGV VDTAVRTSDA GYLTRRLVEV
     VQHIVVRRTD CGTVRGISVS PQNGMMPERN FIQTLIGRVL ADDIYMGSRC IAIRNQDIGI
     GLVNRFITFR TQPISIRTPF TCRSTSWICR LCYGRSPTHG DLVELGEAVG IIAGQSIGEP
     GTQLTLRTFH TGGVFTGGTA EHIRAPSNGK IKFNEDLVHP TRTRHGHPAF LCSIDLYVTI
     ESEDSIHNVT IPPKSFLLVQ NDQYVESEQV IAEISAGTYT FKERVQKHIY SDSEGEMHWS
     TDVYHAPKFA YSNVHLLPKT SHLWILSGGS CRSSAVPFSP HKDQDQMSIH SISVERRYIS
     SLSVDNDQVI HKFCSSDFSG KKEVRIHDYS ELNRMICTGH SNFIYPAILH DNLDLLAKRR
     RNRFLIPFQS IQEQEKELMP HSGISIKIPI NAIFLKNSIL AYFDDPQYRR KSSGITKYGT
     IGVHPTVKKE KEDLIEYRGI KEFKPKCQMQ MKVDRLFFIP EEVHILPESS SIMVRNNSIV
     GVDTQITLNT RSRAGGLVRV ERKKRVVELX IFSGGIHFPG ETDKISRHSG ILIAPXRGKT
     NSKESKKWKN GIXVQRITPT KKKSFVLVRP VVTYEIADGI NLARLFPQDL LXEEDNMQLQ
     VVNYILYGNG KLIRGISDTS IQLVRTCLVL NWDQDTKSSS MEEARASFVE VSTNGLIRDF
     LRIDLVKSPI LYIRKRNDPS GSGLISNNES GHTSINPFYS IYPKGRIKQS LSQNQGTIRT
     LLNRNKECQS LIILSSSNCF RMGPFNDVKY PNVIKESIQM KKDSLIPIKN TSGPLGTDLQ
     IANFYSFYHL ITHNQISVTK YLQLDNLKQT FQVLKYYLTD ENRRIYNPDP CSNIILNPFH
     LNWYFLHHNS NHNYCEKTST IISIGQFICE NVCIDKSEPH LKSGQVLIVQ VDSVVIRLAK
     PYLVTPGATV HGHYGEICYG GDTLVTFIYE KSTSSDITQG LPKVERAFEV RSLDSISMNL
     EKRVEGWNKC ITRILGIPWG FLIGAELTIA QSRIFLVNMI QKVYRSQGVQ IHNRHIEIIV
     RQITSKVLVS EEGMSNVFLP GELIGLLRAE RTGRALDEAI CYRAILLGIT RASLNTQSFI
     SEASFQETAR VLA
//