ID   A9XWA1_9ROSI            Unreviewed;      1268 AA.
AC   A9XWA1;
DT   05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT   05-FEB-2008, sequence version 1.
DT   27-MAR-2024, entry version 48.
DE   RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE   Flags: Fragment;
GN   Name=rpoC2 {ECO:0000313|EMBL:ABV65761.1};
OS   Ochna mossambicensis.
OG   Plastid; Chloroplast {ECO:0000313|EMBL:ABV65761.1}.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Ochnaceae; Ochna.
OX   NCBI_TaxID=473047 {ECO:0000313|EMBL:ABV65761.1};
RN   [1] {ECO:0000313|EMBL:ABV65761.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=19223592; DOI=10.1073/pnas.0813376106;
RA   Wang H., Moore M.J., Soltis P.S., Bell C.D., Brockington S.F.,
RA   Alexandre R., Davis C.C., Latvis M., Manchester S.R., Soltis D.E.;
RT   "Rosid radiation and the rapid rise of angiosperm-dominated forests.";
RL   Proc. Natl. Acad. Sci. U.S.A. 106:3853-3858(2009).
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DR   EMBL; EU002527; ABV65761.1; -; Genomic_DNA.
DR   AlphaFoldDB; A9XWA1; -.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   CDD; cd02655; RNAP_beta'_C; 1.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.150.390; -; 1.
DR   Gene3D; 1.10.1790.20; -; 1.
DR   HAMAP; MF_01324; RNApol_bact_RpoC2; 1.
DR   InterPro; IPR012756; DNA-dir_RpoC2_beta_pp.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   PANTHER; PTHR48355; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   PANTHER; PTHR48355:SF1; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 2.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   3: Inferred from homology;
KW   Chloroplast {ECO:0000313|EMBL:ABV65761.1};
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Plastid {ECO:0000313|EMBL:ABV65761.1};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          65..129
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF05000"
FT   DOMAIN          144..337
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
FT   DOMAIN          1154..1240
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ABV65761.1"
FT   NON_TER         1268
FT                   /evidence="ECO:0000313|EMBL:ABV65761.1"
SQ   SEQUENCE   1268 AA;  143981 MW;  95E5C4C23BC8A9A1 CRC64;
     HFGMAYTSHI LDQVKTLGFQ QATATSISLG IDDLLTIPSK GWLVQDAEKQ SFILEKHHHY
     GNVHAVEKLR QSIEIWYATS EYLRQEMNPN FRMTEPFNPV HIMSFSGARG NTSQVHQLVG
     MRGLMSDPQG QMIDLPIQSN LREGLSLTEY IISCYGARKG VVDTAVRTSD AGYLTRRLVE
     VVQHIVVRRI DCGTARGISV SPRNGMMPER IFIQTLIGRV LADNIYMGLR CVAIRNQDIG
     IGLVNRFITF RLQPISIRTP FTCRSTSWIC RLCYGRSPTH GDLVELGEAV GIIAGQSIGE
     PGTQLTLRTF HTGGVFTGGT AEHVRAPSNG KIKFNEDLVH PTRTRHGHPA FLCYIDLYVT
     IESQDIIHNV TIPPKSFLLV QNDQYVESEQ VIAEIRAGAY TLNFKERVRK HIYSDLEGEM
     HWSTNVYHAP EFTYSNVHFL PKTSHLWILS GGSCKFSKVP FSLHKDQDQM NVHSLSVERI
     SSPSVNNDQL KHKFFSSDLS GKKQSVIPDS SELNQIIWTG HCNLIYPAIP HENSDLLAKR
     RRNRFIIPFQ SIQERAKELM SHSGISIEIP INGIFRRNSI FAYFDDPQYR RRSSGITKYG
     GIGAHSIVKK EDLVEYGRVK EFKPKYQMKV DHFFFIPEEV FIFSEFSSLM VRNNSIIGVN
     TQITLNTRSR VGGLVRVERK KKKMELKIFS GDIHFPGETD KISRHSGILI PPGRVKTNSK
     ESKKVKNWIY VQRITPTKKK HFVLVRPVII YEIADGINLE TLFPQGLLKE KENLKLRVVN
     YIFYGNGKPI RGISDTNIQL VRTCLVLNWD QDKKSSSIEE AHASFVEVST NGLIRDFLRI
     KCHISYISRK RNDPSGSGVL SDNGPDHTII NPFYSKGRIQ QLLKQNQGTI STLLNRNKER
     QSLIILSSSN CFRMDPFTDG KYHNVIKESI QKNPIRNSLG PLGTAPQISN SYSFYHLITH
     NQISVTQYLK LDNFKQTFQV IKYYLMDENR RILNPDPCSV LNPFNLNWYF LHHNYHYYGE
     ERFTVISLGQ FICENVCIAK KKKGPHLKSG QVIIVHVDSV VLRSAKLYLA TPGATVHGHY
     GEILYEGDTL VTFIYEKSRS GDITQGLPKV EQVLEVRSID SISINLEKRV EGWNECIPRI
     LGIPWGFLIG AELTIVQSRI SLVNKIQKVY RSQGVQIHNR HIEIIVRQIT SKVLVSEDGM
     SNVFSPGELI GLLRAERTGR ALEEAICYRV ILLGITKASL NTQSFISEAS FQETARVLSK
     AALRGRID
//