ID B0XIM2_CULQU Unreviewed; 667 AA.
AC B0XIM2;
DT 08-APR-2008, integrated into UniProtKB/TrEMBL.
DT 08-APR-2008, sequence version 1.
DT 24-JAN-2024, entry version 78.
DE RecName: Full=Small ribosomal subunit protein mS39 {ECO:0000256|ARBA:ARBA00035134};
GN Name=6053400 {ECO:0000313|EnsemblMetazoa:CPIJ019121-PA};
GN ORFNames=CpipJ_CPIJ019121 {ECO:0000313|EMBL:EDS29446.1};
OS Culex quinquefasciatus (Southern house mosquito) (Culex pungens).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae;
OC Culicinae; Culicini; Culex; Culex.
OX NCBI_TaxID=7176;
RN [1] {ECO:0000313|EMBL:EDS29446.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JHB {ECO:0000313|EMBL:EDS29446.1};
RG The Broad Institute Genome Sequencing Platform;
RA Atkinson P.W., Hemingway J., Christensen B.M., Higgs S., Kodira C.,
RA Hannick L., Megy K., O'Leary S., Pearson M., Haas B.J., Mauceli E.,
RA Wortman J.R., Lee N.H., Guigo R., Stanke M., Alvarado L., Amedeo P.,
RA Antoine C.H., Arensburger P., Bidwell S.L., Crawford M., Camaro F.,
RA Devon K., Engels R., Hammond M., Howarth C., Koehrsen M., Lawson D.,
RA Montgomery P., Nene V., Nusbaum C., Puiu D., Romero-Severson J.,
RA Severson D.W., Shumway M., Sisk P., Stolte C., Zeng Q., Eisenstadt E.,
RA Fraser-Liggett C., Strausberg R., Galagan J., Birren B., Collins F.H.;
RT "Annotation of Culex pipiens quinquefasciatus.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblMetazoa:CPIJ019121-PA}
RP IDENTIFICATION.
RC STRAIN=JHB {ECO:0000313|EnsemblMetazoa:CPIJ019121-PA};
RG EnsemblMetazoa;
RL Submitted (FEB-2021) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
CC -!- SIMILARITY: Belongs to the mitochondrion-specific ribosomal protein
CC mS39 family. {ECO:0000256|ARBA:ARBA00008551}.
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DR EMBL; DS233330; EDS29446.1; -; Genomic_DNA.
DR RefSeq; XP_001869494.1; XM_001869459.1.
DR AlphaFoldDB; B0XIM2; -.
DR STRING; 7176.B0XIM2; -.
DR EnsemblMetazoa; CPIJ019121-RA; CPIJ019121-PA; CPIJ019121.
DR GeneID; 6053400; -.
DR KEGG; cqu:CpipJ_CPIJ019121; -.
DR VEuPathDB; VectorBase:CPIJ019121; -.
DR VEuPathDB; VectorBase:CQUJHB006993; -.
DR eggNOG; KOG4422; Eukaryota.
DR HOGENOM; CLU_026264_0_1_1; -.
DR InParanoid; B0XIM2; -.
DR OMA; MDVCRNH; -.
DR OrthoDB; 2966953at2759; -.
DR Proteomes; UP000002320; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0043024; F:ribosomal small subunit binding; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0032543; P:mitochondrial translation; IEA:InterPro.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR037387; PTCD3.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR16276; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3; 1.
DR PANTHER; PTHR16276:SF1; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR Pfam; PF17177; PPR_long; 1.
PE 3: Inferred from homology;
KW Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW Reference proteome {ECO:0000313|Proteomes:UP000002320};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 238..360
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
SQ SEQUENCE 667 AA; 76803 MW; A9797F5CF1A47EE9 CRC64;
MNNLCRSVSK LPALPAFRIA TGKRLFGTQT VRRQSTSTES KEKIVIPARI ERGPTDILNA
LSSTVGYDPT APHYKYHDDP YLMPMSNVGK KTFAMAQEAG RKAARWIRQE NAKLFRHQEA
DPPIPAFAPT MVYTEESQVE ETDLRRLIEN VEVQDAILVY NLLKKNNIEV SPELKQSLLE
LVCFFNHEES LEEEYIEERW FRQGVTEKGR QRKTWKDFEL AEQLFHEVEE KRPEHYCVLI
RGMAKYYQVE KAWALYQETI EKKVLLDTTT FNSLLQIASF LKESYDMRWD LVCEVLTTMK
NQGLRPNVGT LNAVLQTITT IGGYNHPRSY ALKTLAEFKK LGVEPSLASW YYMLAIFCRE
RGPTSHILHD IMNEIEGKEF GIVDPKDTFF FVTAMDVCRN HLHDKDLAKR VNKLLHHKDN
YNLIGDSYKE SIYYRHFFMV LCSTEPLETF METYHLLVPN VYIPEPSVIE EILKSIDVNC
AIEHVPLLWS HMIQFDHTNR ENLLLLLLQI MITNPPKTPE LVQKFTAIAW DMYTRLEEQS
ALAGTRNQKS VALSGALLGD ILLLVCRGRE EFEKAQTIFE KLNTEQNAIV GDPKVEAMRS
FIQFCIDERK PSLAIGALQY CAENGFPESA ELGRNIVRSL TLDEVHLGKI KRLVGAEVLK
PVEEVAK
//
