ID B2RYB3_RAT Unreviewed; 908 AA.
AC B2RYB3;
DT 01-JUL-2008, integrated into UniProtKB/TrEMBL.
DT 01-JUL-2008, sequence version 1.
DT 27-MAR-2024, entry version 108.
DE SubName: Full=Srrm1 protein {ECO:0000313|EMBL:AAI66715.1};
GN Name=Srrm1 {ECO:0000313|EMBL:AAI66715.1, ECO:0000313|RGD:1311258};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116 {ECO:0000313|EMBL:AAI66715.1};
RN [1] {ECO:0000313|EMBL:AAI66715.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Prostate {ECO:0000313|EMBL:AAI66715.1};
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RA Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H.,
RA Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M.,
RA Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.,
RA Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F.,
RA Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T.,
RA Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F.,
RA Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E.,
RA Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y.,
RA Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E.,
RA Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y.,
RA Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W.,
RA Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J.,
RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J.,
RA Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W.,
RA Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J.,
RA Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I.,
RA Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U.,
RA Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A.,
RA Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [2] {ECO:0007829|PubMed:22673903}
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=22673903;
RA Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C.,
RA Olsen J.V.;
RT "Quantitative maps of protein phosphorylation sites across 14 different rat
RT organs and tissues.";
RL Nat. Commun. 3:876-876(2012).
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DR EMBL; BC166715; AAI66715.1; -; mRNA.
DR RefSeq; NP_001101456.2; NM_001107986.2.
DR AlphaFoldDB; B2RYB3; -.
DR SMR; B2RYB3; -.
DR IntAct; B2RYB3; 2.
DR iPTMnet; B2RYB3; -.
DR PhosphoSitePlus; B2RYB3; -.
DR PaxDb; 10116-ENSRNOP00000052955; -.
DR PeptideAtlas; B2RYB3; -.
DR GeneID; 313620; -.
DR KEGG; rno:313620; -.
DR AGR; RGD:1311258; -.
DR CTD; 10250; -.
DR RGD; 1311258; Srrm1.
DR VEuPathDB; HostDB:ENSRNOG00000018194; -.
DR eggNOG; KOG2146; Eukaryota.
DR HOGENOM; CLU_015415_0_0_1; -.
DR OrthoDB; 276172at2759; -.
DR Bgee; ENSRNOG00000018194; Expressed in thymus and 20 other cell types or tissues.
DR ExpressionAtlas; B2RYB3; baseline and differential.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; ISO:RGD.
DR GO; GO:0005681; C:spliceosomal complex; ISO:RGD.
DR GO; GO:0051179; P:localization; ISO:RGD.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR GO; GO:0048024; P:regulation of mRNA splicing, via spliceosome; IBA:GO_Central.
DR Gene3D; 1.20.1390.10; PWI domain; 1.
DR InterPro; IPR002483; PWI_dom.
DR InterPro; IPR036483; PWI_dom_sf.
DR PANTHER; PTHR23148; SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN; 1.
DR PANTHER; PTHR23148:SF0; SERINE_ARGININE REPETITIVE MATRIX PROTEIN 1; 1.
DR Pfam; PF01480; PWI; 1.
DR SMART; SM00311; PWI; 1.
DR SUPFAM; SSF101233; PWI domain; 1.
DR PROSITE; PS51025; PWI; 1.
PE 1: Evidence at protein level;
SQ SEQUENCE 908 AA; 102433 MW; 46B3451FE7CF4BDE CRC64;
MDAGFFRGTS AEQDNRFSNK QKKLLKQLKF AECLEKKVDM SKVNLEVIKP WITKRVTEIL
GFEDDVVIEF IFNQLEVKNP DSKMMQINLT GFLNGKNARE FMGELWPLLL SAQENIAGIP
SAFLELKKEE IKQRQIEQEK LASLKKQDED KDKRDKEEKE SSREKRERSR SPRRRKSRSP
SPRRRSSPVR RERKRSHSRS PRHRTKSRSP SPAPEKKEKS PELPEPSVRM KDSSVQEATS
TSDILKAPKP EPVPEPKEPS PEKNSKKEKE KTRPRSRSRS KSRSRTRSRS PSHTRPRRRH
RSRSRSYSPR RRPSPRRRPS PRRRTPPRRM PPPPRHRRSR SPGRRRRRSS ASLSGSSSSS
SSSRSRSPPK KPPKRTSSPP RKTRRLSPSA SPPRRRHRPS SPATPPPKTR HSPTPQQSNR
ARKSRVSVSP GRTSGKVTKH KGTEKRESPS PAPKPRKVEL SESEEDKGSK MAAADSVQQR
RQYRRQNQQS SSDSGSSSTS EDERPKRSHV KNGEVGRRRR HSPSRSASPS PRKRQKETSP
RSRRRRSPSP PPARRRRSPS PAPPPPPPPP PRRRRSPTPP PRRRTPSPPP RRRSPSPRRY
SPPIQRRYSP SPPPKRRTAS PPPPPKRRAS PSPPPKRRVS HSPPPKQRSP PVTKRRSPSL
SSKHRKGSSP GRSTREARSP QPNKRHSPSP RPRAPQTSSP PPVRRGASAS PQGRQSPSPS
TRPIRRVSRT PEPKKIKKAA SPSPQSVRRV SSSRSVSGSP EPTAKKPPAP PSPVQSQSPS
TNWSPAAPAK KAKSPTPSPS PARNSDQEGG GKKKKKKKDK KHKKDKKHKK HKKHKKEKAV
AVATPAPAAP AAVSAAATPS AQEEPAAAPE PRKETESEAE DDNLDDLERH LREKALRSMR
KAQVSPQS
//
