ID B3QKP0_RHOPT Unreviewed; 876 AA.
AC B3QKP0;
DT 02-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 02-SEP-2008, sequence version 1.
DT 27-MAR-2024, entry version 77.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACF03137.1};
GN OrderedLocusNames=Rpal_4646 {ECO:0000313|EMBL:ACF03137.1};
OS Rhodopseudomonas palustris (strain TIE-1).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=395960 {ECO:0000313|EMBL:ACF03137.1, ECO:0000313|Proteomes:UP000001725};
RN [1] {ECO:0000313|EMBL:ACF03137.1, ECO:0000313|Proteomes:UP000001725}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TIE-1 {ECO:0000313|EMBL:ACF03137.1,
RC ECO:0000313|Proteomes:UP000001725};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Emerson D.,
RA Newman D.K., Roden E., Richardson P.;
RT "Complete sequence of Rhodopseudomonas palustris TIE-1.";
RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP001096; ACF03137.1; -; Genomic_DNA.
DR RefSeq; WP_012497427.1; NC_011004.1.
DR AlphaFoldDB; B3QKP0; -.
DR KEGG; rpt:Rpal_4646; -.
DR HOGENOM; CLU_000445_70_25_5; -.
DR OrthoDB; 9814202at2; -.
DR Proteomes; UP000001725; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08448; PAS_4; 2.
DR Pfam; PF12860; PAS_7; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 29..55
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 185..256
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 469..600
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 609..863
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 876 AA; 95954 MW; F514A25A17AB3CFD CRC64;
MSTCLFSAAA NAAPGFVPAS YIGSIEPEIL WELLIGGFVV AAFTCATALW ATSMLRKQRR
AHRRKNILVD SVLNKLQQGV VIADASGRIV FCNDRYLAMY DLTRAEVTPG MPGRDLLALR
RARGMLDLTN DEFYRNAGLP QGYVAELPDG RCIQVKFSRL ANGGTIATHD DCSELRRMSK
ELSTTKQFLE SVIDNIPVCV AAKSIEDGRY ILANRAFETL SGLSRDKIIG ATADQLYPAR
SAASIREADQ SALQSITGAF QSELTVELGR GDRILASNRV VARNEHGEPE FLIALFEDVT
NRRALSVELE KTKRFLELVI DNIPVALTVQ NTADGRYMLA NRGAEIILNR RREDATGLTT
GEIFNAKEAR LIAERDELAI RKGGLVVEEH PISTAGGLRL FVTRRMTVTD EADQAHYLIK
THVDVTDRRQ TEARMAHMAY HDGLTDLPNR DAFLKSLTQM IEACDNAVDE FAVLSVDLDG
LKEINDVFGH AIGDKLLIEV ARRIEWASRG GVVARLSGDE FGLIIDGPQP AAARDLASMV
AKALAPGFVI DGKTVRIGVT TGVALFPANG TDAASLLANA GAALFRAKAK ARGSVTVFEP
EMDMQIRDRR VLHQDLSNAI RNGEMSLYYQ PQASSTKRVG NNDIVGFEAL TRWRHPTRGF
VPPSEFIPLA EESGLIVELG EWILREACRQ AASWARPLQV AVNLSPAQFL NTDLVAFVHE
VLLQTGLEPG RLELEITEGV LIEDFDRGLS LLRRLKALGV RVSMDDFGSG YSSLTYLQAF
PFDKIKIDRA FIMNLGRNPQ SAAIVRAVIG LGHGLGVTLV AEGVETQDQL DFLVDESCDA
VQGYLIGKPA PIDQYRWLVG LDALEDRAPA RAREAG
//
