ID B4W8V8_9CAUL Unreviewed; 634 AA.
AC B4W8V8;
DT 23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 23-SEP-2008, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=DbpA RNA binding domain family {ECO:0000313|EMBL:EDX80167.1};
GN ORFNames=BBAL3_1324 {ECO:0000313|EMBL:EDX80167.1};
OS Brevundimonas sp. BAL3.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Caulobacterales;
OC Caulobacteraceae; Brevundimonas.
OX NCBI_TaxID=391600 {ECO:0000313|EMBL:EDX80167.1, ECO:0000313|Proteomes:UP000003957};
RN [1] {ECO:0000313|EMBL:EDX80167.1, ECO:0000313|Proteomes:UP000003957}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BAL3 {ECO:0000313|EMBL:EDX80167.1,
RC ECO:0000313|Proteomes:UP000003957};
RA Hagstrom A., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G.,
RA Rogers Y.-H., Friedman R., Frazier M., Venter J.C.;
RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|RuleBase:RU000492}.
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DR EMBL; DS989898; EDX80167.1; -; Genomic_DNA.
DR RefSeq; WP_008260808.1; NZ_DS989898.1.
DR AlphaFoldDB; B4W8V8; -.
DR STRING; 391600.BBAL3_1324; -.
DR eggNOG; COG0513; Bacteria.
DR HOGENOM; CLU_003041_21_3_5; -.
DR OrthoDB; 9805696at2; -.
DR Proteomes; UP000003957; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProt.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd12252; RRM_DbpA; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR005580; DbpA/CsdA_RNA-bd_dom.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR PANTHER; PTHR47959:SF19; ATP-DEPENDENT RNA HELICASE DBPA; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF03880; DbpA; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU000492};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU000492};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU000492};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU000492}.
FT DOMAIN 30..206
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 229..401
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 427..462
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 528..634
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 427..452
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 556..596
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 619..634
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 634 AA; 69209 MW; 6AA361C0D3763104 CRC64;
MPFPAVHPAL DRALVNKGYA EPTPVQAAVL EGEYAERDLL VSAQTGSGKT VAFGLAAAPT
LLGDKPIFGP GGAPLCLAIA PTRELAMQVA AELQWLYADS GAKIATCVGG MDARREARAL
GFGVHIVVGT PGRLKDHIDR GNLDLSELKV AVLDEADEML DMGFREDLEF ILDHAPAERR
TLLFSATIAR EIVTLAKRYQ KDAVRIDATD KSRQHADIEY RAYRIAPNEI EHAVVNTLRW
YEAPRAMVFC STRDSVRHLQ ASLLERGFST VSLSGEMGQR ERTDALQALR DGRARVCVAT
DVAARGLDLP DLGLVIHAEL PMNRAGLLHR SGRTGRAGKK GVSVMLVPHS RRRKAERLMD
EAGIDAVWSG APTFDEIRKA DEGRLLSPEF FEADVSDEDM IVAKRMIAER TPDEIAAALV
RLLRKEQPAP EELSDPGSDR SPVKRERTVR NEDGTAAQPW PGDRLGADDV VWFRLDVGRN
KNADPKWLIP LICRIGGISK PQIGAIRTFP EETRFEIAKT HEKAFREAVA ASNDEVKITS
SEAPTPGSMK AGKFAGAGKP RREDGDRPFK KTPYKRADGG EGDARPPFKK KPWAPKADAG
GENPRSNAAG DKPFAKKPFK AKPGFKKAGF KPKA
//
