GenomeNet

Database: UniProt
Entry: B6B3B3_9RHOB
LinkDB: B6B3B3_9RHOB
Original site: B6B3B3_9RHOB 
ID   B6B3B3_9RHOB            Unreviewed;       465 AA.
AC   B6B3B3;
DT   25-NOV-2008, integrated into UniProtKB/TrEMBL.
DT   25-NOV-2008, sequence version 1.
DT   24-JAN-2024, entry version 54.
DE   RecName: Full=Chitooligosaccharide deacetylase {ECO:0000256|ARBA:ARBA00020071};
DE   AltName: Full=Nodulation protein B {ECO:0000256|ARBA:ARBA00032976};
GN   ORFNames=RB2083_1532 {ECO:0000313|EMBL:EDZ42017.1};
OS   Rhodobacteraceae bacterium HTCC2083.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Paracoccaceae.
OX   NCBI_TaxID=314270 {ECO:0000313|EMBL:EDZ42017.1, ECO:0000313|Proteomes:UP000005746};
RN   [1] {ECO:0000313|Proteomes:UP000005746}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HTCC2083 {ECO:0000313|Proteomes:UP000005746};
RX   PubMed=21036993; DOI=10.1128/JB.01268-10;
RA   Kang I., Vergin K.L., Oh H.M., Choi A., Giovannoni S.J., Cho J.C.;
RT   "Genome sequence of strain HTCC2083, a novel member of the marine clade
RT   Roseobacter.";
RL   J. Bacteriol. 193:319-320(2011).
CC   -!- FUNCTION: Is involved in generating a small heat-stable compound (Nod),
CC       an acylated oligomer of N-acetylglucosamine, that stimulates mitosis in
CC       various plant protoplasts. {ECO:0000256|ARBA:ARBA00003236}.
CC   -!- SIMILARITY: Belongs to the polysaccharide deacetylase family.
CC       {ECO:0000256|ARBA:ARBA00010973}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; DS995276; EDZ42017.1; -; Genomic_DNA.
DR   AlphaFoldDB; B6B3B3; -.
DR   STRING; 314270.RB2083_1532; -.
DR   eggNOG; COG0726; Bacteria.
DR   eggNOG; COG3195; Bacteria.
DR   HOGENOM; CLU_029940_2_0_5; -.
DR   OrthoDB; 9787041at2; -.
DR   UniPathway; UPA00394; UER00652.
DR   Proteomes; UP000005746; Unassembled WGS sequence.
DR   GO; GO:0051997; F:2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity; IEA:UniProtKB-EC.
DR   GO; GO:0016810; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; IEA:InterPro.
DR   GO; GO:0000255; P:allantoin metabolic process; IEA:InterPro.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR   GO; GO:0006144; P:purine nucleobase metabolic process; IEA:UniProtKB-KW.
DR   GO; GO:0019628; P:urate catabolic process; IEA:UniProtKB-UniPathway.
DR   CDD; cd10977; CE4_PuuE_SpCDA1; 1.
DR   Gene3D; 3.20.20.370; Glycoside hydrolase/deacetylase; 1.
DR   Gene3D; 1.10.3330.10; Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; 1.
DR   InterPro; IPR011330; Glyco_hydro/deAcase_b/a-brl.
DR   InterPro; IPR002509; NODB_dom.
DR   InterPro; IPR018020; OHCU_decarboxylase.
DR   InterPro; IPR017580; OHCU_decarboxylase-1.
DR   InterPro; IPR036778; OHCU_decarboxylase_sf.
DR   InterPro; IPR017625; PuuE.
DR   NCBIfam; TIGR03164; UHCUDC; 1.
DR   NCBIfam; TIGR03212; uraD_N-term-dom; 1.
DR   PANTHER; PTHR43123; POLYSACCHARIDE DEACETYLASE-RELATED; 1.
DR   PANTHER; PTHR43123:SF1; POLYSACCHARIDE DEACETYLASE-RELATED; 1.
DR   Pfam; PF09349; OHCU_decarbox; 1.
DR   Pfam; PF01522; Polysacc_deac_1; 1.
DR   SUPFAM; SSF88713; Glycoside hydrolase/deacetylase; 1.
DR   SUPFAM; SSF158694; UraD-Like; 1.
DR   PROSITE; PS51677; NODB; 1.
PE   3: Inferred from homology;
KW   Nodulation {ECO:0000256|ARBA:ARBA00022458};
KW   Purine metabolism {ECO:0000256|ARBA:ARBA00022631};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005746}.
FT   DOMAIN          68..280
FT                   /note="NodB homology"
FT                   /evidence="ECO:0000259|PROSITE:PS51677"
SQ   SEQUENCE   465 AA;  52241 MW;  D67E62235C5DC2B7 CRC64;
     MTRYPRDMHG YGATPPAANW PNGAKIAVQI VMNYEEGGEN NILHGDAASE AFLSEIVGAA
     AWPGQRHWNM ESIYEYGARA GFWRLHRLLE NTPITVYGVA TALARAPAQV RAMKEAGWEI
     ASHGLKWIEY KDASADDEKA DMDEAIRLHT EVVGEAPRGW YTGRCSCNTI QLAAENGSFK
     YVADSIADDV PYWMEFGEHD QLVVPYTMDA NDMRFATPQG FNTGAHFFEY LKASFDVLYA
     EGGRMMSIGL HCRLMGRPGR AQALQQFLEY ANSHEDVWFA TREQIADHWA AQNPHVRYAR
     PSEMSRETFV TKFGSIFEHS PWIAQGAFEL ELGRTHDTAI GLHNALCRIF RSATEEQRLG
     VLTAHPDLAG KLAQAKSLTA ESTSEQAAAG LDFLTEDEKA TFTKLNTEYV TKHGFPFIIA
     VRDHDKASIL DAFNRRTKND RDTEFKEACK QVERIADFRL MDILP
//
DBGET integrated database retrieval system