ID B6EJY5_ALISL Unreviewed; 114 AA.
AC B6EJY5;
DT 25-NOV-2008, integrated into UniProtKB/TrEMBL.
DT 25-NOV-2008, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=Putative HNH nuclease YajD {ECO:0000256|ARBA:ARBA00040194};
GN OrderedLocusNames=VSAL_I1247 {ECO:0000313|EMBL:CAQ78932.1};
OS Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain
OS LFI1238)).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Aliivibrio.
OX NCBI_TaxID=316275 {ECO:0000313|EMBL:CAQ78932.1, ECO:0000313|Proteomes:UP000001730};
RN [1] {ECO:0000313|EMBL:CAQ78932.1, ECO:0000313|Proteomes:UP000001730}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LFI1238 {ECO:0000313|EMBL:CAQ78932.1,
RC ECO:0000313|Proteomes:UP000001730};
RX PubMed=19099551; DOI=10.1186/1471-2164-9-616;
RA Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N.,
RA Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S.,
RA Thurston S., Parkhill J., Willassen N.P., Thomson N.R.;
RT "The genome sequence of the fish pathogen Aliivibrio salmonicida strain
RT LFI1238 shows extensive evidence of gene decay.";
RL BMC Genomics 9:616-616(2008).
CC -!- SIMILARITY: Belongs to the HNH nuclease family.
CC {ECO:0000256|ARBA:ARBA00038412}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; FM178379; CAQ78932.1; -; Genomic_DNA.
DR RefSeq; WP_012549975.1; NC_011312.1.
DR AlphaFoldDB; B6EJY5; -.
DR KEGG; vsa:VSAL_I1247; -.
DR eggNOG; COG1403; Bacteria.
DR HOGENOM; CLU_136125_1_0_6; -.
DR Proteomes; UP000001730; Chromosome 1.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00085; HNHc; 1.
DR InterPro; IPR002711; HNH.
DR InterPro; IPR003615; HNH_nuc.
DR PANTHER; PTHR41286; HNH NUCLEASE YAJD-RELATED; 1.
DR PANTHER; PTHR41286:SF1; HNH NUCLEASE YAJD-RELATED; 1.
DR Pfam; PF01844; HNH; 1.
DR SMART; SM00507; HNHc; 1.
PE 3: Inferred from homology;
KW Endonuclease {ECO:0000313|EMBL:CAQ78932.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722}.
FT DOMAIN 19..74
FT /note="HNH nuclease"
FT /evidence="ECO:0000259|SMART:SM00507"
SQ SEQUENCE 114 AA; 13196 MW; 92D637ADC9684844 CRC64;
MSSDFYGSSS TYARQESGYR EKALKLYPWV CGNCAREFVY SNLRELTVHH KDHDHTNNPN
DGSNWELLCL FCHDHEHSKY TEHDQYGSEI KAGEDDHQSA THNPFAALKA MMKK
//
