ID B6XSA1_9BIFI Unreviewed; 361 AA.
AC B6XSA1;
DT 20-JAN-2009, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2009, sequence version 1.
DT 24-JAN-2024, entry version 80.
DE SubName: Full=Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEB22473.1};
GN ORFNames=BIFCAT_00108 {ECO:0000313|EMBL:EEB22473.1};
OS Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=566552 {ECO:0000313|EMBL:EEB22473.1, ECO:0000313|Proteomes:UP000003882};
RN [1] {ECO:0000313|EMBL:EEB22473.1, ECO:0000313|Proteomes:UP000003882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16992 {ECO:0000313|EMBL:EEB22473.1,
RC ECO:0000313|Proteomes:UP000003882};
RA Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA Gordon J.;
RT "Draft genome sequence of Bifidobacterium catenulatum (DSM 16992).";
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EEB22473.1, ECO:0000313|Proteomes:UP000003882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16992 {ECO:0000313|EMBL:EEB22473.1,
RC ECO:0000313|Proteomes:UP000003882};
RA Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEB22473.1}.
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DR EMBL; ABXY01000001; EEB22473.1; -; Genomic_DNA.
DR RefSeq; WP_003833666.1; NZ_JGYT01000005.1.
DR AlphaFoldDB; B6XSA1; -.
DR GeneID; 45581967; -.
DR KEGG; bcat:BBCT_0058; -.
DR PATRIC; fig|566552.18.peg.62; -.
DR eggNOG; COG1609; Bacteria.
DR Proteomes; UP000003882; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06291; PBP1_Qymf-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR001761; Peripla_BP/Lac1_sug-bd_dom.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF95; RIBOSE OPERON REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF00532; Peripla_BP_1; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..56
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 361 AA; 39235 MW; 67AFBA3D63B2ED1B CRC64;
MVGMRDVAKK AGVSLSTVSL VVNGNGYVSD DMRERVRKAM QLLNYVPNEL ARNLYHDRTN
LVGVIVPTIR HPFFATFTAH LQHALAAQGL RTMLCSTADE AGGEIQYVDM LRRHMMDGIV
MCAHTSHPGD YWTSIHRPIV AFDRVLGDGI SSIGSDHEQG GRLIAQMLIR NGAKHVVVIG
GPRDQFFDLA ARGEVEEGPF DLGKTTFPTV RYYLTLEQEL TSVGVKYEYV EAGEVMDFAG
FHRAVSNALD KVTTDGVDAV VSSDIGASFC VREALSRGIS IPDELQIVAY DGTYLTDLAG
MKLTAVAQDF AAIAQSVADH IVQAIANEEV AAANASRKNV PKPFEPNVLI PMTLVPGDTT
R
//
