ID B7FPM9_PHATC Unreviewed; 559 AA.
AC B7FPM9;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 08-NOV-2023, entry version 41.
DE RecName: Full=Transmembrane protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PHATRDRAFT_42812 {ECO:0000313|EMBL:EEC51702.1};
OS Phaeodactylum tricornutum (strain CCAP 1055/1).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae;
OC Phaeodactylum.
OX NCBI_TaxID=556484 {ECO:0000313|EMBL:EEC51702.1, ECO:0000313|Proteomes:UP000000759};
RN [1] {ECO:0000313|EMBL:EEC51702.1, ECO:0000313|Proteomes:UP000000759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC51702.1,
RC ECO:0000313|Proteomes:UP000000759};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [2] {ECO:0000313|Proteomes:UP000000759}
RP GENOME REANNOTATION.
RC STRAIN=CCAP 1055/1 {ECO:0000313|Proteomes:UP000000759};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S.,
RA Rokhsar D., Bowler C.;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000605; EEC51702.1; -; Genomic_DNA.
DR RefSeq; XP_002177239.1; XM_002177203.1.
DR AlphaFoldDB; B7FPM9; -.
DR PaxDb; 2850-Phatr42812; -.
DR GeneID; 7196172; -.
DR KEGG; pti:PHATRDRAFT_42812; -.
DR eggNOG; ENOG502T7UU; Eukaryota.
DR HOGENOM; CLU_305768_0_0_1; -.
DR InParanoid; B7FPM9; -.
DR OrthoDB; 44718at2759; -.
DR Proteomes; UP000000759; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR010640; Low_temperature_requirement_A.
DR PANTHER; PTHR36840; BLL5714 PROTEIN; 1.
DR PANTHER; PTHR36840:SF1; BLL5714 PROTEIN; 1.
DR Pfam; PF06772; LtrA; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000759};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 125..141
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 161..179
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 191..212
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 233..253
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 290..318
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 363..382
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 402..426
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 522..540
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 20..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..57
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 559 AA; 62421 MW; 2C3C6DAB8D65642E CRC64;
MEKPSPGDAV NCVGFINESQ HEINLEDEGP PKQASDDMHA SQRPSAESER RMQRRMGVSA
EDAPYDITYH PGRVQFYAPP MQRQRWGETQ VLPRVNWGDL FFDLFYVAAT YNVSNIVIQQ
PDKEGLLYAA GTFLPVMGFW MDKTSYDARF VNGDDLFHRV YQTLMLCIIA LAILHIRPVE
IMSNSSENSS MLVFCACLVI ERILVIGLYA DIYYCGVGQR VIKKAAFDQI CRMLIPGLVY
GIGAVLAGIE YFGRDTSAST RDLAEVDNEV NSATEDSTFQ EAGPNFTRNI PILLCLLGHV
GFVLALIVWI TFFFPAGGRH KEITVPLNIA FVIHRNGEWI MLMLGESIFS ILIVDIPDEG
SDFYITFYSG ILLVILLQIL HFRSQPHDPN VHAMRRHKNA GILWNAVNQI YSCALVSLGA
AFTFFLTNFE LDSSYSRQLA EGGSGLSVEE AEEKAAHIFC GSLSIVFLSL DVMEVLHLGV
DESKDRCLCE QRRTYNGKGI ALLAARIGLL VFTGTLSQWV TGAEVLCCIV ASCVLMQLLL
RKLGAMYLIH HQISDIPEK
//
