ID B7G5L0_PHATC Unreviewed; 712 AA.
AC B7G5L0;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PHATRDRAFT_47986 {ECO:0000313|EMBL:EEC46165.1};
OS Phaeodactylum tricornutum (strain CCAP 1055/1).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae;
OC Phaeodactylum.
OX NCBI_TaxID=556484 {ECO:0000313|EMBL:EEC46165.1, ECO:0000313|Proteomes:UP000000759};
RN [1] {ECO:0000313|EMBL:EEC46165.1, ECO:0000313|Proteomes:UP000000759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC46165.1,
RC ECO:0000313|Proteomes:UP000000759};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [2] {ECO:0000313|Proteomes:UP000000759}
RP GENOME REANNOTATION.
RC STRAIN=CCAP 1055/1 {ECO:0000313|Proteomes:UP000000759};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S.,
RA Rokhsar D., Bowler C.;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000617; EEC46165.1; -; Genomic_DNA.
DR RefSeq; XP_002182264.1; XM_002182228.1.
DR AlphaFoldDB; B7G5L0; -.
DR STRING; 556484.B7G5L0; -.
DR PaxDb; 2850-Phatr47986; -.
DR GeneID; 7203230; -.
DR KEGG; pti:PHATRDRAFT_47986; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_357714_0_0_1; -.
DR InParanoid; B7G5L0; -.
DR OrthoDB; 91385at2759; -.
DR Proteomes; UP000000759; Chromosome 15.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF366; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR DMR1; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13812; PPR_3; 2.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000759}.
FT REPEAT 308..345
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 384..414
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 712 AA; 80418 MW; 3327712706ECBF35 CRC64;
MKPVAIMQST AVPYRRVIAK LLTQAARRQQ HLATAFSVSN FSNSKSESFR KFSSAKADVP
PRASNRFPQK FSSREKYQRL LEAPLGSFTK EMWTDARRLI YDTSPPSKYS TAATPVTDTR
RSILLLERAL KENAVDSQPW LSDGKAFNKI IKQWRIYANE RRYVLSPAEM ARLLEEVTRR
TPSFHYTQST LSMILDVAAR QENPVKAPAV AESILQLMID ESASKSHSMR PNRVIWNQVL
GAWSSCGLPE APERMEDLLG RMKGYGIEPD VVSYTLLIKY WSRSLSTEAP SEIEKVMKRM
ETLGLAPNLV TWNNLLRYWS HNGQKYAPLE ANAVLERMEK QGIQPSGISW NHLLEGWASS
DLPEAPEQIK KILLRMTKEG YPPTTLSYNV LIKAYANAGE LSKAEALFEQ MMRGYENGNT
SIQPNDATCF LLLSAYSKSN MASAVTRAER FLDVLLKGSI PNIKVAVKHF NSAIMACLKQ
GETSRADRLL HRMADYGIPL NKSTFTVILM AWSRVKSPEA PRKAENIVTF MREQAKNGNR
AVQPDSRAVN YVLHAWASSG VPEARTEMLR VFDQLESGEM GISPDWSSYA TIVQCLLTFN
TEEALERAET ILLNVPSSVH IEGEGLYKLY VMVIESCLQR AECLRAENLF QRMTKAHETS
TSRLNTKWYF YVIRALVKAG EPERASSAYE RLQDLERMGL LEVGKLPLTP IG
//
