ID B8AA90_ORYSI Unreviewed; 647 AA.
AC B8AA90;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=Chloroplast PPR domain-containing protein {ECO:0000313|EMBL:AHB19306.1};
GN ORFNames=OsI_02428 {ECO:0000313|EMBL:EEC70890.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EEC70890.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EEC70890.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2] {ECO:0000313|EMBL:EEC70890.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA Kristiansen K., Wong G.K.-S.;
RT "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:EEC70890.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA Kristiansen K., Wong G.K.-S.;
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AHB19306.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=24821718;
RA Tan J., Tan Z., Wu F., Sheng P., Heng Y., Wang X., Ren Y., Wang J., Guo X.,
RA Zhang X., Cheng Z., Jiang L., Liu X., Wang H., Wan J.;
RT "A Novel Chloroplast-Localized Pentatricopeptide Repeat Protein Involved in
RT Splicing Affects Chloroplast Development and Abiotic Stress Response in
RT Rice.";
RL Mol. Plant 0:0-0(2014).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; KC543701; AHB19306.1; -; mRNA.
DR EMBL; CM000126; EEC70890.1; -; Genomic_DNA.
DR AlphaFoldDB; B8AA90; -.
DR STRING; 39946.B8AA90; -.
DR EnsemblPlants; BGIOSGA003765-TA; BGIOSGA003765-PA; BGIOSGA003765.
DR Gramene; BGIOSGA003765-TA; BGIOSGA003765-PA; BGIOSGA003765.
DR HOGENOM; CLU_022912_0_0_1; -.
DR OMA; RRNISCA; -.
DR Proteomes; UP000007015; Chromosome 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR45613:SF476; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 3.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 8.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000007015};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 153..187
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 188..223
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 224..258
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 259..293
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 294..328
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 329..363
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 399..433
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 434..468
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 41..66
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 647 AA; 73016 MW; 46DEFF7FC30A1883 CRC64;
MEAAASLPLP ASRFLSPPPH PTPAAAACCS RRNISCARAA PRALEAPQAS RPPPRPSPRR
SAVAEVKAAP DPVAALTRFE DVLQTQDCNI ILRHYGETRR WDELSKVFGW MQEHDMLNIA
SYSSYFKFLG LSRNPARALQ VYGAIRENPT RIHVSVCNSV LGCLVKNGRF DSSFKLYDEM
IREGLSPDLF TYSTLLSGCM KLKQGYTKAL ELVNELNSRG FQMDSVIYGT LLAICASHNC
CEKAEEYFQK MKDEGHKPNL FHYSSLLNAY SENANYEKAD LLMKDLRSSG LTPNKVILTT
LLKVYSKGGL FEKARELLTE LEASGFAQDE MPYCILIDGL VKERKIWEAM ILFNDMKEKG
VKSDGYAFSI MISALHRGGY REESKQLAKE FEAKNATYDL VMLNTSLRAY CSTNDMESVM
IMLRKMDESN ISPDAITFNT LIRYFCMAKV YHLAYKTIQD MHTKGHQLNE ELCSEIMMQL
GEAGFPSEAF SVYNMLRYGK RTVCKSLHEK VLCILVPAGL LKDAYVVVKD NSEFISRRSL
GNFARSFMAS GNINLINDVM KAVHRSGWRI SQDIFGKAIQ RYIQKPDKKQ LLLCLLDWMT
GQGYSVDSSS RNLLLRNAQL FGQKQLIAEI LSKQQGASRI TSQRHQK
//
