ID B8AAC8_ORYSI Unreviewed; 846 AA.
AC B8AAC8;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 13-SEP-2023, entry version 71.
DE RecName: Full=serine--tRNA ligase {ECO:0000256|ARBA:ARBA00012840};
DE EC=6.1.1.11 {ECO:0000256|ARBA:ARBA00012840};
DE AltName: Full=Seryl-tRNA synthetase {ECO:0000256|ARBA:ARBA00031113};
GN ORFNames=OsI_02425 {ECO:0000313|EMBL:EEC70888.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EEC70888.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EEC70888.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
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DR EMBL; CM000126; EEC70888.1; -; Genomic_DNA.
DR AlphaFoldDB; B8AAC8; -.
DR STRING; 39946.B8AAC8; -.
DR EnsemblPlants; BGIOSGA003763-TA; BGIOSGA003763-PA; BGIOSGA003763.
DR Gramene; BGIOSGA003763-TA; BGIOSGA003763-PA; BGIOSGA003763.
DR HOGENOM; CLU_336910_0_0_1; -.
DR Proteomes; UP000007015; Chromosome 1.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004828; F:serine-tRNA ligase activity; IEA:UniProtKB-EC.
DR GO; GO:0006434; P:seryl-tRNA aminoacylation; IEA:InterPro.
DR CDD; cd00770; SerRS_core; 1.
DR Gene3D; 1.10.10.1440; PHAX RNA-binding domain; 1.
DR Gene3D; 1.10.287.40; Serine-tRNA synthetase, tRNA binding domain; 1.
DR InterPro; IPR002314; aa-tRNA-synt_IIb.
DR InterPro; IPR006195; aa-tRNA-synth_II.
DR InterPro; IPR045864; aa-tRNA-synth_II/BPL/LPL.
DR InterPro; IPR019385; PHAX_RNA-binding_domain.
DR InterPro; IPR038092; PHAX_RNA-binding_sf.
DR InterPro; IPR002317; Ser-tRNA-ligase_type_1.
DR InterPro; IPR015866; Ser-tRNA-synth_1_N.
DR InterPro; IPR042103; SerRS_1_N_sf.
DR InterPro; IPR033729; SerRS_core.
DR InterPro; IPR010978; tRNA-bd_arm.
DR NCBIfam; TIGR00414; serS; 1.
DR PANTHER; PTHR11778:SF7; SERINE--TRNA LIGASE, CYTOPLASMIC-RELATED; 1.
DR PANTHER; PTHR11778; SERYL-TRNA SYNTHETASE; 1.
DR Pfam; PF10258; PHAX_RNA-bd; 1.
DR Pfam; PF02403; Seryl_tRNA_N; 1.
DR Pfam; PF00587; tRNA-synt_2b; 1.
DR PRINTS; PR00981; TRNASYNTHSER.
DR SUPFAM; SSF55681; Class II aaRS and biotin synthetases; 1.
DR SUPFAM; SSF46589; tRNA-binding arm; 1.
DR PROSITE; PS50862; AA_TRNA_LIGASE_II; 1.
PE 4: Predicted;
KW Aminoacyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00023146};
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000007015}.
FT DOMAIN 187..406
FT /note="Aminoacyl-transfer RNA synthetases class-II family
FT profile"
FT /evidence="ECO:0000259|PROSITE:PS50862"
FT REGION 552..574
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 603..669
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 757..822
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 49..100
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 641..657
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 784..822
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 846 AA; 92815 MW; A7CAC267E6AEE601 CRC64;
MLDINLFRTE KGGDPELIRR SQRNRSASVE LVDEVIALDD QWRQRQFELD KIRQELNKTS
KEIGKLKAKK EDASALIQST EEIKKRLAAK ETEVQEAKGT LDAKLVTIGN IVHESVPVSD
DEANNLIVRT WGERRLEGNL KNHVDLCKML DIVALEKGAD VAGGRGYYLK DEGVLLNLAL
INFGLAFLRK RGFKPMQTPF FMRKETMGKC AQLAQFDEEL YKAIIIVKQS GNDTFSLIKC
NFSGMRYAGY STCFRKEAGS HGRDTAGIFR VHQFEKIEQF CVTSPNDNES WEMHEEMIKN
SEDFYKEIGL PYQLVSIVSG ALNDAAAKKY DLEAWFPASK TYRELVSCSN CTDFQARRLG
IGYGQKKNDE QSKQFVHMLN STLTATERTL CCILENFQKE NGVEVPKALQ PYMGGIDFLP
FKLDSKQAGS KNWKMRDLCA LLINPGAFAH SPREFERSHQ RQENISWANG EAAGAALNQS
ISGSSSPVAG PQGLTKGGAK PPYSALRLLP PPSIAAASAA LSFIAIVVRP TPGGEERTGG
DGHRERVWVT SCPSGAPHRG GGGGGGSRAG MEGGDSVLDA VLDEEALDYD GDDVEMADAD
DAVEEAQAQE DPVAITAPTA AATGGGGGGG EGDGGVGQAG KNKNKKKKKR KKSARTKNKG
KPDGPPKIAD INRFVNETCK RLKEKKSYLV WNAVGCLGVS AISDLVREVE AIQKCGGQIV
ADGSRFRTGG GILWNILKSR EPKAYKEIMA KGRELEKQFR YKQGRPQTSR NEDASSQGSA
LIDEDIEPHG EKEVSDDPER LIDAEKSPHV PDNNKAERKP LADRIRVLVA YDDLFEEGEI
HEGDAP
//
