ID B8B3W9_ORYSI Unreviewed; 604 AA.
AC B8B3W9;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};
GN ORFNames=OsI_22085 {ECO:0000313|EMBL:EEC80201.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EEC80201.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EEC80201.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
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DR EMBL; CM000131; EEC80201.1; -; Genomic_DNA.
DR AlphaFoldDB; B8B3W9; -.
DR STRING; 39946.B8B3W9; -.
DR EnsemblPlants; BGIOSGA021703-TA; BGIOSGA021703-PA; BGIOSGA021703.
DR Gramene; BGIOSGA021703-TA; BGIOSGA021703-PA; BGIOSGA021703.
DR HOGENOM; CLU_000680_33_5_1; -.
DR Proteomes; UP000007015; Chromosome 6.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd01650; RT_nLTR_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR46890:SF1; FGR14P; 1.
DR PANTHER; PTHR46890; NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007015}.
FT DOMAIN 468..558
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 604 AA; 68363 MW; 7703CF907D27F3A1 CRC64;
MDVMPPMLLL GQPGVEGRWM EEGVTASASQ NLNRRRDVLA PVTMSFLDDK DDKAFLLALA
PTKEAAVASS DSKSRRLYMT SSPTSTSNFP RELNKTNIVL IPKKNRPANP ADFRPISLCN
VMYKVIAKSI ANRIKAPPLF LLISMVNPMV LLMLIEELDK VAPLSPYLFV LALNELSEQL
NEALLNNQLK GTSLSPQGPA IHSLLYADDL IITGEATEIE ARIIKEIIDI FCNRSGQTPN
WNKSFILFSK HTPHHIKEFI TRIFHVAPVD ANTKHLGHPL FVTNRTKAFV YQFIVDKFRT
KLTILKANKL SHAGRLTLIK SVFASLPIYY MATTLLPKKL TSKLTSIIRT FWWTGVKEGQ
DKKPLCSKSW SDICKPTQEG WLGIRDIHLV NKGLILNATW RLVTKPEEQT QMQVNVQAST
SMERKMERIP EGNRCYVDAS WDDYKTGIGI FFHFPATHNA LFVKANSCMA DSPLQAELLA
LQLALEIALL LNFTDTIFLT DCSMVADTTK KRSFQEDPGY WSLLPFWSQI QTLPDHLLRV
YWIPRTLNKT ADKLAKEARE NFSSPVFSCQ NISHIAYPLR SCFASVLNSN TRFRNYNINH
VLCF
//
