ID B8BP75_ORYSI Unreviewed; 1986 AA.
AC B8BP75;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 79.
DE RecName: Full=Helicase and polymerase-containing protein TEBICHI {ECO:0008006|Google:ProtNLM};
GN ORFNames=OsI_38041 {ECO:0000313|EMBL:EEC69123.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EEC69123.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EEC69123.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
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DR EMBL; CM000137; EEC69123.1; -; Genomic_DNA.
DR STRING; 39946.B8BP75; -.
DR EnsemblPlants; BGIOSGA037256-TA; BGIOSGA037256-PA; BGIOSGA037256.
DR Gramene; BGIOSGA037256-TA; BGIOSGA037256-PA; BGIOSGA037256.
DR HOGENOM; CLU_000818_2_0_1; -.
DR OMA; HNMCQQF; -.
DR Proteomes; UP000007015; Chromosome 12.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0051301; P:cell division; IEA:EnsemblPlants.
DR GO; GO:0006261; P:DNA-templated DNA replication; IEA:InterPro.
DR GO; GO:1990067; P:intrachromosomal DNA recombination; IEA:EnsemblPlants.
DR GO; GO:0009933; P:meristem structural organization; IEA:EnsemblPlants.
DR GO; GO:0009640; P:photomorphogenesis; IEA:EnsemblPlants.
DR GO; GO:2000011; P:regulation of adaxial/abaxial pattern formation; IEA:EnsemblPlants.
DR GO; GO:1902749; P:regulation of cell cycle G2/M phase transition; IEA:EnsemblPlants.
DR GO; GO:0010468; P:regulation of gene expression; IEA:EnsemblPlants.
DR CDD; cd18026; DEXHc_POLQ-like; 1.
DR CDD; cd08638; DNA_pol_A_theta; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.20; -; 1.
DR Gene3D; 3.30.70.370; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR001098; DNA-dir_DNA_pol_A_palm_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR002298; DNA_polymerase_A.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR046931; HTH_61.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR048960; POLQ-like_helical.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR10133; DNA POLYMERASE I; 1.
DR PANTHER; PTHR10133:SF62; DNA POLYMERASE THETA; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00476; DNA_pol_A; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF20470; HTH_61; 1.
DR Pfam; PF21099; POLQ_helical; 1.
DR PRINTS; PR00868; DNAPOLI.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00482; POLAc; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF158702; Sec63 N-terminal domain-like; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000007015}.
FT DOMAIN 482..674
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 714..906
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 266..305
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1277..1296
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..31
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 270..285
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1986 AA; 217725 MW; 7BB11194450F28D9 CRC64;
MASGSSRANI DQFFPAKKRR PSSRKDEPPS GSPRGAKGSL EGYLVRSPST AAAASLDSPR
GGGDAAGARR SLSAAMDVDV GHPATAVATD EGDFELKRFA MEFLSLSHYC SVIPSVMGGA
SNGEAGKQQK RSAIQSFLAP CSNASAKKQR VAHSGDLEAL KVVDVGHKTP FREKCGTQYG
GPEAWSFTPN TGQKRVGFST APGAGETPMS VSTNSLISPG EEFWNAAIEF ADGISARAEK
GPGRPECDAD DKSSCAVALC SKILPRSGNG GSDHENTVGS NETKQMDRSS YKEEPVAANN
HHVNSSPLPV KHLDFFHEDE IQVPGLKIEE KGGAVDLSPK SQMKNRENLT HSVDNVNKST
FDMHIDSSAT IHDECLSKLT TEGKNHPTRV GDSGSCLTRR DLNQLIYSED KLLTAYSDHG
KPSKDCTNKF ASQEMEANTP TSSVPQKDHS KLSSWLPPEL CAIYMKKGIP ELYPWQVECL
LVEGVLEKRN LVYCASTSAG KSFVAEILML RRILFSGKMA ILVLPYVSIC AEKAEHLEQL
LEPLGRHVRS FYGNQGGGSL PKDTSVAVCT IEKANSLVNK LLEEGRLSEL GIIVIDELHM
VGDQHRGYLL ELMLTKLRYA AGEGNSESSS GEISGSSSGK MDATHGLQII GMSATMPNVA
AVADWLQAAL YQTEFRPVPL EEFIKVGNQV FDKDMNVVRV LPKVADLGGK DPDHIVELCN
EVVQQGHSVL LFCSSRKGCE STARHVAKFL KVASVGSSDV GSEFPDATFA VEALKRSPSG
LDPVLEETLP SGVAYHHAGL TVEEREIVET CYRKGLVRVL AATSTLAAGV NLPARRVIFR
QPRIGRDFID GTRYKQMSGR AGRTGIDTKG ESILVCKPEE VKRITGILRS NCTPLESCLS
EDKNGMTHAI MEVVAGGIVQ TASDIHRYVR CTLLNSTKPF EDVVKSAQDS LRWLCHKRFL
EWNNETKIYS TTPLGLAAFG SSLNPEESLV VLDDLSRARE GFVLACDLHL VYLVTPINVD
VEPDWELYYE RFMQLTSLEQ SVGNRVGVIE PFLMHMAHGA AMPVRGKPQR AGIRNRSPTR
GSGGNALINE QALRVSKRFY VALMLSRLAQ EIPVTDVCEA FKVARGMIQA LQENAGRFAS
MVSVFCQRLG WHDLEGLVAK FQNRVCFGVR AEIAELTSIP FVKGSRARAL YKSGLRTPVA
IAEASIPEIA KALFESSTWS GQGDSGLRRM QLGIAKKIKN GARKIVLEEA EAARVAAFSA
FKSLGVQVPQ FTTPLLPTID EPPTRDSMVS VGRGQASDDT NNCFSYGSQR ASTERTLGND
MHPGSSIQIT ESARIVNNAN IVVQVASPFS IETKLSSRNV ADKGPVNAYN FPGGFDSFLD
QWSTVSEFSF DLHYVKKSIK SSSTYFDILG LAVCWENSPV YYCNFPKDLM MAGSNDSIEM
WDELTRRWNR VIEIMRQNSV KKMTWNLKFQ IQALKYPCVS CQRLSRLHLD YKMLKNVEVL
DNLYVFLQPV SVHSGLDICL VAWVLWPDEE SKTVPNLEKT RALCSVLRKL LVSQNLNDLL
ETIEGPLVNV LADMELWGIG ADMDACLRAR HIIIRKLKEL EKEAYKLAGK SFSLNATADI
ADVLYTHLKL PVPKGCGKGK LHPSTDKQSL DHLRDQHPII SVIKEHRTLA KLLNGTLGSI
CSRAQLCSKS QRYIIQGNWL QTSTATGRLS MEEPNLQENW LLVTADYSQI ELRLMAHFSK
DTALIELLSK PDGDVFTMIA SRWTGKAESL ICSKERETTK RFIYGILYGM GANSLAEQLE
CSPEDAAQKI QSFKRFFPGV SSWLHEAVAS CRHKGYVETL MGRRRFLSKI TAGNSKEKAK
AQRQAVNSIC QGSAADIIKV AMIKVHSAIT NGSTVGATVD SIDVAMQNFS EIRGRCHLIL
QVHDELVLEV DPCMVAEAVR LLQTVMENSA SLLGPSVSFL LLRATLNLYK TGYIASVTES
IVENED
//
