ID B8CC46_THAPS Unreviewed; 512 AA.
AC B8CC46;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=VTT domain-containing protein {ECO:0000259|Pfam:PF09335};
GN ORFNames=THAPSDRAFT_9729 {ECO:0000313|EMBL:EED88892.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED88892.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED88892.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED88892.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED88892.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED88892.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
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DR EMBL; CM000649; EED88892.1; -; Genomic_DNA.
DR RefSeq; XP_002293883.1; XM_002293847.1.
DR AlphaFoldDB; B8CC46; -.
DR PaxDb; 35128-Thaps9729; -.
DR EnsemblProtists; EED88892; EED88892; THAPSDRAFT_9729.
DR GeneID; 7448862; -.
DR KEGG; tps:THAPSDRAFT_9729; -.
DR eggNOG; KOG3140; Eukaryota.
DR HOGENOM; CLU_532681_0_0_1; -.
DR InParanoid; B8CC46; -.
DR OMA; KVFCFDA; -.
DR Proteomes; UP000001449; Chromosome 14.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR032816; VTT_dom.
DR PANTHER; PTHR46826; -; 1.
DR PANTHER; PTHR46826:SF1; TVP38_TMEM64 FAMILY MEMBRANE PROTEIN YDJX; 1.
DR Pfam; PF09335; SNARE_assoc; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 65..83
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 124..154
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 160..179
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 143..264
FT /note="VTT"
FT /evidence="ECO:0000259|Pfam:PF09335"
SQ SEQUENCE 512 AA; 54872 MW; E5B039E588946291 CRC64;
MSEEDEAELK RVQEESRMKV LTDRRKSIRG ILKAAESSKN FRLQNGYVPE LDPDTGKPIS
SDSKSAVAIT AFVVAAGAVA LRIGGRAALV SALGLDFATE NPELREGLNS VLQYADTVGT
ETELALFILA WTAVKVFCFD AGGVVLALAS GILFGGVWQG AVVSAFAATV GSSIAFGMAK
LDTPVRKKAL EVVDEYPSLR GIEKVVAKDG LKAILTLRLA PVLPIPLGIY NYVYGVTNVP
YLDFAGGIFL GSLKPYLLDS YLGVFGKQIV DGTAGEVGSL QDALLLVALG VSVLIGVFAS
QLANETWESI NEEVEREKAE KAAAEGEGGE IDDYDGITRE FMGMDVPKWI IGFQLALQAA
DKRVNTMIED EYHAKVWNYT AEELESPSST VINPATQPDS PEVVNANTGF DFGASICDGL
VLSPALLGAY LRYADPLYEE EEKNDTVIDA ERKATVVDAT SLSLGDATST GNDRLTAKTP
QQYQSMAAVS VDDLFEALNR LRSQVESKLD PL
//
