ID B9FM90_ORYSJ Unreviewed; 913 AA.
AC B9FM90;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 80.
DE RecName: Full=E3 SUMO-protein ligase SIZ1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=OsJ_16961 {ECO:0000313|EMBL:EEE62174.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:EEE62174.1};
RN [1] {ECO:0000313|EMBL:EEE62174.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2] {ECO:0000313|EMBL:EEE62174.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J.,
RA Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R.,
RA Kristiansen K., Wong G.K.-S.;
RT "Improved gene annotation of the rice (Oryza sativa) genomes.";
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Protein modification; protein sumoylation.
CC {ECO:0000256|ARBA:ARBA00004718}.
CC -!- SIMILARITY: Belongs to the PIAS family.
CC {ECO:0000256|ARBA:ARBA00005383}.
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DR EMBL; CM000142; EEE62174.1; -; Genomic_DNA.
DR AlphaFoldDB; B9FM90; -.
DR iPTMnet; B9FM90; -.
DR UniPathway; UPA00886; -.
DR Proteomes; UP000007752; Chromosome 5.
DR GO; GO:0019789; F:SUMO transferase activity; IEA:UniProt.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0016925; P:protein sumoylation; IEA:UniProtKB-UniPathway.
DR CDD; cd15570; PHD_Bye1p_SIZ1_like; 1.
DR CDD; cd16792; SP-RING_Siz-like; 1.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR InterPro; IPR031141; SIZ1/2_SP-RING.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR004181; Znf_MIZ.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR10782:SF4; E3 SUMO-PROTEIN LIGASE SIZ1; 1.
DR PANTHER; PTHR10782; ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF02037; SAP; 1.
DR Pfam; PF02891; zf-MIZ; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00513; SAP; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF68906; SAP domain; 1.
DR PROSITE; PS50800; SAP; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS51044; ZF_SP_RING; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00452}.
FT DOMAIN 12..46
FT /note="SAP"
FT /evidence="ECO:0000259|PROSITE:PS50800"
FT DOMAIN 349..430
FT /note="SP-RING-type"
FT /evidence="ECO:0000259|PROSITE:PS51044"
SQ SEQUENCE 913 AA; 100985 MW; 382F16730247A8B4 CRC64;
MADLVSSCKD KLAYFRIKEL KDILNQLGLP KQGKKQDLID RVLALLTDEQ GQRHHGWGRK
NSLTKEAVAK IVDDTYRKMQ IQCAPDLATR SHSGSDFSFR PIEEAYDSFQ PEAKVRCICS
STMVNDSMIQ CEDQRCQVWQ HLNCVLIPDK PGESAEVPPV FYCELCRLSR ADPFWVTAGN
PLLPVKFVSS GVTNDGTSVP QSVEKSFQLS RSDRETVQRQ EYDLQVWCML LNDKVQFRMQ
WPQYAELHVN GISVRVVTRP GSQLLGINGR DDGPLITTCS REGINKICLS RVDARTFCFG
VRIAKRRTVA QVLNLVPKEA EGESFEHALA RVRRCLGGGD TAENADSDSD LEVVAESVTV
NLRCPNSGSR MRIAGRFKPC IHMGCFDLET FVELNQRSRK WQCPICLKNY SLESLMIDPY
FNRITSLLRN CNEDVNEVDV KPDGSWRVKG DAASRELSQW HMPDGTLCNP KEDVKPAMQN
GNEQMMEGTS DGQKSLKIGI KRNPNGIWEV SSKADDKKPS VVGNRMQNNS GFRALNNIMH
MSNSPTSSYR DGEDPSVNQE SNRHVDLSLN NGNNEFDSFS LNFGQACNTD DRPQQQHNAT
DVIVLSDSDE ENDAMVCPPA VYDNTTTANG SGFPFTTNGI GYTERYQEDA GVGTSGLGLL
SNNVDDFEMN NWQMHSSYQQ PEQGFQFFGN DTDVHNTFVG SHNSFGLAPN DYSLDCNVGV
EEASVTPALS VCRNSNEMHG SLVDNPLALV GDDPSLQIFL PSQPSSVPLQ EELSERANAP
NGVQSDDWIS LTLAAGGGGN EEPAPADVNS QPQIPSTETG IEPLTDAASA FLSTNIERRS
GADLNPRRIE NIFSHPRQPR ILHLDDGFWR SALLRLGMTH ECLPGSLLAQ GARGNMQFVP
EAAPDLPGDG IAQ
//
