ID B9GSN5_POPTR Unreviewed; 704 AA.
AC B9GSN5;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 2.
DT 24-JAN-2024, entry version 81.
DE RecName: Full=BTB domain-containing protein {ECO:0000259|PROSITE:PS50097};
GN ORFNames=POPTR_002G052700 {ECO:0000313|EMBL:PNT47936.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT47936.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT47936.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729}, and
RC Nisqually-1 {ECO:0000313|EMBL:PNT47936.1};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
RN [2] {ECO:0000313|EMBL:PNT47936.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Nisqually-1 {ECO:0000313|EMBL:PNT47936.1};
RA Tuskan G., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U.,
RA Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L.,
RA Aerts A., Bhalerao R., Bhalerao R., Blaudez D., Boerjan W., Brun A.,
RA Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J.,
RA Chen G., Cooper D., Coutinho P., Couturier J., Covert S., Cronk Q.,
RA Cunningham R., Davis J., Degroeve S., Dejardin A., Depamphilis C.,
RA Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B.,
RA Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L.,
RA Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R.,
RA Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R.,
RA Joshi C., Kangasjarvi J., Karlsson J., Kelleher C., Kirkpatrick R.,
RA Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.,
RA Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C.,
RA Nelson D., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G.,
RA Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P.,
RA Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J.,
RA Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.,
RA Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G.,
RA Yin T., Douglas C., Marra M., Sandberg G., Van De Peer Y., Rokhsar D.;
RT "WGS assembly of Populus trichocarpa.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM009291; PNT47935.1; -; Genomic_DNA.
DR EMBL; CM009291; PNT47936.1; -; Genomic_DNA.
DR RefSeq; XP_002300845.2; XM_002300809.2.
DR AlphaFoldDB; B9GSN5; -.
DR STRING; 3694.B9GSN5; -.
DR EnsemblPlants; Potri.002G052700.2.v4.1; Potri.002G052700.2.v4.1; Potri.002G052700.v4.1.
DR GeneID; 7480041; -.
DR Gramene; Potri.002G052700.2.v4.1; Potri.002G052700.2.v4.1; Potri.002G052700.v4.1.
DR KEGG; pop:7480041; -.
DR eggNOG; KOG0167; Eukaryota.
DR HOGENOM; CLU_392026_0_0_1; -.
DR InParanoid; B9GSN5; -.
DR OMA; RIMPDIR; -.
DR OrthoDB; 1085234at2759; -.
DR Proteomes; UP000006729; Chromosome 2.
DR CDD; cd18352; BTB_POZ_ARIA_plant; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 4.
DR InterPro; IPR044282; ABAP1/ARIA.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000225; Armadillo.
DR InterPro; IPR000210; BTB/POZ_dom.
DR InterPro; IPR011333; SKP1/BTB/POZ_sf.
DR PANTHER; PTHR46710; ARM REPEAT PROTEIN INTERACTING WITH ABF2; 1.
DR PANTHER; PTHR46710:SF9; BTB DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00514; Arm; 3.
DR Pfam; PF00651; BTB; 1.
DR SMART; SM00185; ARM; 8.
DR SMART; SM00225; BTB; 1.
DR SUPFAM; SSF48371; ARM repeat; 2.
DR SUPFAM; SSF54695; POZ domain; 1.
DR PROSITE; PS50176; ARM_REPEAT; 5.
DR PROSITE; PS50097; BTB; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 147..197
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REPEAT 197..232
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REPEAT 239..281
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REPEAT 323..365
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REPEAT 364..406
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT DOMAIN 540..607
FT /note="BTB"
FT /evidence="ECO:0000259|PROSITE:PS50097"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..30
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 704 AA; 77845 MW; 94399E2D21B6EA67 CRC64;
MDRRTISTRK GSKRKLEQDF EHENQDRHKI PATDTAAGYE SHQKLTRHIQ TQVDILNSSF
SSLEADRAAA RRATSVLSQF AKTEELVDTM VDCGAVPALV MHLQAPPHTR GENGSKLYEH
EVEKGSALAL GLLAVKPEHQ QLIVDAGALT HLVELLKRHK SVDNSRTVNG VVRKAADAIT
NLAHENSGIK TRVRIEGAIP YLVELLEHAD AKVQRAAAGA LRTLAFKNDE NKNQIAECNA
LPTLVIMLGS EDTAIHYEAV GVIGNLVHSS PHIKKAVLLA GALQPVIGLL SSPCSESQRE
AALLLGQFAA ADSDCKVHIV QRGAVKPLID MLESSDVQLK EMAAFALGRL AQETHNQAGI
AHNGGIVPLL RLLDSKSGPL QHNAAFTLYG LVDNEDNVAD LIKVGGFQKL QYGEFIVQQT
KDCVAKTMRR LEEKIHGRVL NHLLYLMRVA ERNIQRRVAL ALAHLCAPDD RKVVFLDKNG
LDLLLGLLES GSVKLQCDGS VALYRLATQA SSVFPVDAAP LSPTPQVYLG EQYVNNPTLS
DVTFLVEGKR FYAHRICLLA SSDAFRAMFD GGYRERNAKD VEIPNIRWDV FELMMRFIYT
GSVEINVDLA QDLLRAADQY LLDGLKRLCE CTIAQDISVE NVSLMYELSE GFNAMSLRES
CILFILEQFD KLCTKPWSSH LIQRIMPDIR HYFEKALSKP TKLT
//
