ID B9HFL8_POPTR Unreviewed; 523 AA.
AC B9HFL8;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 2.
DT 24-JAN-2024, entry version 78.
DE RecName: Full=K Homology domain-containing protein {ECO:0000259|SMART:SM00322};
GN ORFNames=POPTR_007G012000 {ECO:0000313|EMBL:PNT26448.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT26448.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT26448.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009296; PNT26448.1; -; Genomic_DNA.
DR RefSeq; XP_002310861.2; XM_002310825.2.
DR AlphaFoldDB; B9HFL8; -.
DR STRING; 3694.B9HFL8; -.
DR EnsemblPlants; Potri.007G012000.1.v4.1; Potri.007G012000.1.v4.1; Potri.007G012000.v4.1.
DR GeneID; 7495543; -.
DR Gramene; Potri.007G012000.1.v4.1; Potri.007G012000.1.v4.1; Potri.007G012000.v4.1.
DR KEGG; pop:7495543; -.
DR eggNOG; KOG2190; Eukaryota.
DR HOGENOM; CLU_018025_3_0_1; -.
DR InParanoid; B9HFL8; -.
DR OMA; GEYRHVE; -.
DR OrthoDB; 774557at2759; -.
DR Proteomes; UP000006729; Chromosome 7.
DR ExpressionAtlas; B9HFL8; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR CDD; cd22459; KH-I_PEPPER_rpt1_like; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 4.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR10288; KH DOMAIN CONTAINING RNA BINDING PROTEIN; 1.
DR PANTHER; PTHR10288:SF269; RNA-BINDING KH DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00013; KH_1; 4.
DR SMART; SM00322; KH; 4.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 4.
DR PROSITE; PS50084; KH_TYPE_1; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 24..114
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 119..194
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 254..327
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 346..421
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 465..506
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 523 AA; 56733 MW; 4E063995760377AE CRC64;
MQHHQKHHRH KRPPRQPLIE LQPGQVAFRV VCHASKIGAL IGHSGSVISQ IRLETGCLVH
CEEAVKGSEH RAIVVAGSAS PERKIAVGED ETVEVSAAQE AVVRVLERMW EVDAVKDGGD
CEGYCGLLAN TSQIGAVVGR EGRNIKRMKR ASGAHIWILP APLCALKEDQ LIQITGSSTV
AVKKAVIAIT SCLQDCPPYE KDEVDLSLEA VRRRRSGSSG DPHAEFFPHL CSLLPTYSEN
IATDKDHKKP NEQLQVQFRM ICPHGAAGSI IGKGGSVVRA LQNQTGASII LAPPITNSDG
RLVTVSALEN LESSHSPAQN ALLLVFARSI EHDIERARSL GLIEEITVTA TLLLPSNRVS
CLIERGGRID SEMIETTGAD IQILQGDQFF YCASNNDVVL QITGESKNVQ NALFQVTSKL
RDNLLPTEML NGLRTGSPYR RAGEISRLHQ SADESLDSNL ETSLKNSVDQ VRDPPSSSLQ
SPQKLHRERT TYSTDNGSSS TTSGKVSELG RALHFLLPRE GGA
//
