ID B9HG29_POPTR Unreviewed; 336 AA.
AC B9HG29;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 85.
DE RecName: Full=Small GTPase LIP1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=POPTR_007G080100 {ECO:0000313|EMBL:PNT27719.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT27719.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT27719.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009296; PNT27719.1; -; Genomic_DNA.
DR RefSeq; XP_002310606.1; XM_002310570.2.
DR AlphaFoldDB; B9HG29; -.
DR STRING; 3694.B9HG29; -.
DR EnsemblPlants; Potri.007G080100.2.v4.1; Potri.007G080100.2.v4.1; Potri.007G080100.v4.1.
DR GeneID; 7456266; -.
DR Gramene; Potri.007G080100.2.v4.1; Potri.007G080100.2.v4.1; Potri.007G080100.v4.1.
DR KEGG; pop:7456266; -.
DR eggNOG; ENOG502QT3S; Eukaryota.
DR HOGENOM; CLU_061105_0_0_1; -.
DR InParanoid; B9HG29; -.
DR OMA; DCRSIFY; -.
DR OrthoDB; 205305at2759; -.
DR Proteomes; UP000006729; Chromosome 7.
DR ExpressionAtlas; B9HG29; baseline.
DR GO; GO:0012505; C:endomembrane system; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IBA:GO_Central.
DR GO; GO:0006886; P:intracellular protein transport; IBA:GO_Central.
DR CDD; cd04102; RabL3; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR PANTHER; PTHR24073; DRAB5-RELATED; 1.
DR PANTHER; PTHR24073:SF128; RAB-LIKE PROTEIN 3; 1.
DR Pfam; PF08477; Roc; 1.
DR PRINTS; PR00449; RASTRNSFRMNG.
DR SMART; SM00175; RAB; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51419; RAB; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 336 AA; 36837 MW; 299F99CE77A9F014 CRC64;
MFWRDREREN KDQNGGPPCG QVRVLVVGDS GVGKTSLVHL IVKGSSSARP PQTIGCTVGV
KHISYGNSSS SSSSIKGDSE RDFFVELWDV SGHDRYKDCR SLFYSQINGV IFVHDLSQRR
TKTSLQKWAS EIAATGTFSA PLSSGGPGGL PVPYIVIGNK SDVAAKEGTR GSSGNLVDAA
RQWVEKQGLL PSSEEIPLTE SFPGSGGLIA AAKEARYDKE AVVKFFRTLI RRRYFSDELP
APSPWSAYPV QRSVQRLDEN TSDEDPFYKT TSLAGDPYKY NTLPPLPAQR NLTPPPTLYP
QQPVSVTESY SIPRFTLTGS QEISNTARLK RMDINV
//
