ID B9ICK4_POPTR Unreviewed; 326 AA.
AC B9ICK4;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 2.
DT 27-MAR-2024, entry version 79.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=POPTR_015G118000 {ECO:0000313|EMBL:PNT01714.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT01714.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT01714.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009304; PNT01714.1; -; Genomic_DNA.
DR RefSeq; XP_002322357.2; XM_002322321.2.
DR AlphaFoldDB; B9ICK4; -.
DR STRING; 3694.B9ICK4; -.
DR EnsemblPlants; Potri.015G118000.1.v4.1; Potri.015G118000.1.v4.1; Potri.015G118000.v4.1.
DR GeneID; 7457634; -.
DR Gramene; Potri.015G118000.1.v4.1; Potri.015G118000.1.v4.1; Potri.015G118000.v4.1.
DR KEGG; pop:7457634; -.
DR eggNOG; KOG1100; Eukaryota.
DR HOGENOM; CLU_038018_3_1_1; -.
DR InParanoid; B9ICK4; -.
DR OMA; QCDIDRI; -.
DR OrthoDB; 779353at2759; -.
DR Proteomes; UP000006729; Chromosome 15.
DR ExpressionAtlas; B9ICK4; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IBA:GO_Central.
DR GO; GO:0043067; P:regulation of programmed cell death; IBA:GO_Central.
DR CDD; cd16649; mRING-HC-C3HC5_CGRF1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR42647:SF12; BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1; 1.
DR PANTHER; PTHR42647; SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 278..314
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 326 AA; 36216 MW; 4D1AE39A36C65DCB CRC64;
MAVETPHMSL NFPSQLIINR DLVKANQANM NLYNTQMDSG LVFNEPVPET LMSFYQSSLG
CDPISAAKAS NKDDSSLTYN VPAVAAPRKR ARDSINDDNF DAFHASQKTK VSPLSSFIDH
DILFQIQQQQ SEIDRFIDDH NQKVRMELEE RKKRQSRMLV SAIQEGMIKK VKEKDEEIQR
MGKINWFLQE KAKSLYVENQ IWRDLAQANE ATANSLRSNL EQVLAHASGG AATLADDAES
SCCGSSDHGR CTLAGGEEGA VKDKMVVVKD NLNHNRMCRK CGERESSVLL LPCRHLCLCT
LCGSNLIGSC PVCDSVMTAS VHVNMS
//
