ID B9LZ52_GEODF Unreviewed; 383 AA.
AC B9LZ52;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 2.
DT 24-JAN-2024, entry version 74.
DE SubName: Full=Ribonuclease D, putative {ECO:0000313|EMBL:ACM18784.2};
GN OrderedLocusNames=Geob_0415 {ECO:0000313|EMBL:ACM18784.2};
OS Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32) (Geobacter
OS daltonii).
OC Bacteria; Thermodesulfobacteriota; Desulfuromonadia; Geobacterales;
OC Geobacteraceae; Geotalea.
OX NCBI_TaxID=316067 {ECO:0000313|EMBL:ACM18784.2, ECO:0000313|Proteomes:UP000007721};
RN [1] {ECO:0000313|EMBL:ACM18784.2, ECO:0000313|Proteomes:UP000007721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22248 / JCM 15807 / FRC-32
RC {ECO:0000313|Proteomes:UP000007721};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C.,
RA Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G.,
RA Kostka J., Richardson P.;
RT "Complete sequence of Geobacter sp. FRC-32.";
RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP001390; ACM18784.2; -; Genomic_DNA.
DR RefSeq; WP_041267279.1; NC_011979.1.
DR AlphaFoldDB; B9LZ52; -.
DR STRING; 316067.Geob_0415; -.
DR KEGG; geo:Geob_0415; -.
DR eggNOG; COG0349; Bacteria.
DR HOGENOM; CLU_042387_3_1_7; -.
DR OrthoDB; 144122at2; -.
DR Proteomes; UP000007721; Chromosome.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd06142; RNaseD_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF00570; HRDC; 2.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 2.
DR SUPFAM; SSF47819; HRDC-like; 2.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007721}.
FT DOMAIN 219..299
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
FT DOMAIN 312..383
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
SQ SEQUENCE 383 AA; 43264 MW; C75AEE29B02A83C6 CRC64;
MQKQSDSTNS PAKGIIETQK DLNLLVEQLS RENILAFDLE ADSLHHYTEK VCLIQVSNLS
QTALIDPLAP VDLSPLAPVL ADRGIRKVFH GADYDMRSLY RDFGLEVCNM FDTMIACQFL
GEKEVGLAAA LKKRFGVELN KKYQKADWSK RPFSAEMIEY AKMDTALLIR LYLQLEEELR
AKGRLEWVEE ESELVSCVRA ASRDHEPLFI RFKGAAKLKP RALAVLEELL RMRDEKARKK
DVPPFRILGN EPLRELAELQ PRTLADLNGI PGLTQKLIET FGREILKVVA KGAAIPVARL
PHFPSTARMI RDRDQEARLK RLKEWREAKA VELGLGVGII ANNSLLEALA DTAPSSPEAL
AEIPFIKCWQ RKEFAAELLD IIQ
//
