ID B9N5T6_POPTR Unreviewed; 501 AA.
AC B9N5T6;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=POPTR_013G132700 {ECO:0000313|EMBL:PNT08192.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT08192.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT08192.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM009302; PNT08192.1; -; Genomic_DNA.
DR RefSeq; XP_006376506.1; XM_006376444.1.
DR AlphaFoldDB; B9N5T6; -.
DR STRING; 3694.B9N5T6; -.
DR EnsemblPlants; Potri.013G132700.1.v4.1; Potri.013G132700.1.v4.1; Potri.013G132700.v4.1.
DR Gramene; Potri.013G132700.1.v4.1; Potri.013G132700.1.v4.1; Potri.013G132700.v4.1.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_019802_3_0_1; -.
DR InParanoid; B9N5T6; -.
DR OMA; YLCMINS; -.
DR OrthoDB; 456770at2759; -.
DR Proteomes; UP000006729; Chromosome 13.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR45717; OS12G0527900 PROTEIN; 1.
DR PANTHER; PTHR45717:SF10; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 3.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 133..167
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 168..202
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 344..378
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 479..501
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 501 AA; 57064 MW; 33F84C860E4DBFE1 CRC64;
MNLFVRSNPS LCLHIDGVLR ALCFSTDTTA ISHSLNRRIS MVEDPMVPVI PVIEKWVQEG
QVVTNSDLKH FIRKLRKIHR FSHALQISQW MSDQRGHNLS PGDVAVRLDL ISKVHGLEQA
VTYFNSVPES LRGLEVYGAL LNCYAHYKHL EEAEATMRKM REMGFVRNVL SYNVMLNLYY
QMGKYEKIQV LMQEMEKWGI CFSNITYKIL LNAYVATSNI EEIKKILMKM EADPLVSIDW
YAYVVAANGY LKAGLIDKTL TMLWRSEQLI SGKSARFACE TLLSLYTAVG NKEQVYRVWN
LYKTKGRSLN SSYLCMINSL LKLDDVDGAE RIWEEWVSIV KFFDIRIPNV MVSAYSKKGL
WEKAEAFVGK IVASGIKIEA STLDRLATGY HVRGQMLKAS ETIKKAISIS QPGWKPNVYT
LAACLEYLKG REDVKKIEDP LKILKEHCHL SSVSYDRLNS SIIDKENLCA RALDHMEGED
QALNGETPAA TEFEDKDSAE I
//
