ID B9RZQ3_RICCO Unreviewed; 648 AA.
AC B9RZQ3;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE SubName: Full=Pre-mRNA splicing factor, putative {ECO:0000313|EMBL:EEF43086.1};
GN ORFNames=RCOM_1000510 {ECO:0000313|EMBL:EEF43086.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
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DR EMBL; EQ973835; EEF43086.1; -; Genomic_DNA.
DR RefSeq; XP_002519222.1; XM_002519176.2.
DR AlphaFoldDB; B9RZQ3; -.
DR STRING; 3988.B9RZQ3; -.
DR GeneID; 8258812; -.
DR KEGG; rcu:8258812; -.
DR eggNOG; KOG1124; Eukaryota.
DR InParanoid; B9RZQ3; -.
DR OrthoDB; 1332at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0009507; C:chloroplast; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR GO; GO:0003727; F:single-stranded RNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR GO; GO:0006417; P:regulation of translation; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR044624; Mbb1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR44917; PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107; 1.
DR PANTHER; PTHR44917:SF1; PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107; 1.
DR Pfam; PF13432; TPR_16; 2.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00386; HAT; 9.
DR SMART; SM00028; TPR; 9.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 293..326
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 49..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 562..593
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 614..648
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..70
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 572..593
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 648 AA; 73489 MW; 7D80094BBA3473EF CRC64;
MHFFSASSSS SSKATSLNLF SSSQNSNNKK YINPASRFSF KVPTKAARPI PYSSKQSSPV
LDQRPPLSSQ SRNREVRKET QKDSFEDLLV VRRPAVEVSG EDSDDEDVVF VNDDKKSSAI
IDAGLEKFAK KMPIFEPERM ELGSSSSQEK PLAVNLDLAL YKAKVLARGY RFAEAEVILQ
KCINYWSEDG RAYVALGKIL TKQSKTAEAR AVYEKGCQAT QGENAYIWQC WAVLENKMGN
IRRARELFDA ATVADKRHIA AWHGWAVLEL KQGNIKKARQ LLAKGIKFCG GNEYIYQTLA
LLEAKANRYE QARYLFRQAT KCNPKSCASW LAWAQVEVQQ ENNLTARELF QKAVQASPKN
RFAWHVWGVF EANIGNIEMA RKLLKIGHTL NPRDPVLLQS LALLEYKHST ANLARVLFRR
ASELDPKHQP VWIAWGWMEW KEGNISAARE LYQRALSIDS SSESAAKCLQ AWGVLEQRVG
NLSLARRLFR SSLNINSQSY ITWMTWAQFE EDQGNSVRAE EIRNLYFQQR TEVVDDASWV
MGVLDIIDPA LDSIKRLLKF DQNKEQESSS SKPGKYEANA NVPSSNADGN LTRSRSGFDL
DSFIKERLSL DQSKVDVQLE TSGNPTPWRV SQRRLWRSSP TKLSKTRT
//
