ID B9SMX6_RICCO Unreviewed; 687 AA.
AC B9SMX6;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Pentatricopeptide repeat-containing protein, putative {ECO:0000313|EMBL:EEF35017.1};
GN ORFNames=RCOM_0482350 {ECO:0000313|EMBL:EEF35017.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
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DR EMBL; EQ974039; EEF35017.1; -; Genomic_DNA.
DR AlphaFoldDB; B9SMX6; -.
DR STRING; 3988.B9SMX6; -.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; B9SMX6; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 139..173
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 240..274
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 453..487
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 488..518
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 23..42
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 687 AA; 76757 MW; 10E00310AE39732C CRC64;
MASLPSVSLS STLKLEPELR KHPSSSSLPT EKSPSTSYQR SSINTQLDGS LEPIKPLEFH
EALCFIKEEK KIEPSYYLPL LQECTKKNSV SEAQVIHAHI IKTGTHKDLA VMTSLVNVYA
KCGAMGNARK IFDSLHRRNV VAWTALMTGY VQNSQPNIAI DVFQDMLESG TLPSNYTLGI
ALNACSAINS IKLGKQLHAF VIKYKLDYDP SIGNALCSLY SKLGSLDSSI NVFQSIGEKN
VISWTAVISA CGENGKAAMG LRFFNEMLLE DIKPNEFTLT TVLSLCCVTL ALVLGRLVHS
LSIKLGYQYN LRITNSIMYL YLKCGHMDEA QILFHKMGST NLVTWNAMIS GHAQAMDLAK
DDFSAQRSGI EALSIFLELN RTGKKPDLFT LSSVLTVCSR LSALGQGEQL HAQTIKSGYL
SDVVVGTALV NMYSKCGSIG KASKAFVEMS TRTLISWTTM ITGLAQHGHS EQALQLFEDM
RLAGVRPNQI TFVGVLAACC HSGMVDEALG YFEMMQKEYR IKPVMDHYGC LIAMFVKLRR
LDEAFDIINK MDFEPSEFIW SILIAGCRNL GKQELGFYAA EQLLKLKLKD TETYVTLLNM
YISAKRWQDV SRVRKLMKEE KLGKFNDWSW ITIKEKIHSF KTTGRLHPHN AKMYELLEEL
LDKAKGSGYQ STQHMEILDV NFYDISV
//
