ID B9T842_RICCO Unreviewed; 906 AA.
AC B9T842;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 65.
DE SubName: Full=WD-repeat protein, putative {ECO:0000313|EMBL:EEF27972.1};
GN ORFNames=RCOM_0399490 {ECO:0000313|EMBL:EEF27972.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
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DR EMBL; EQ974912; EEF27972.1; -; Genomic_DNA.
DR RefSeq; XP_002534411.1; XM_002534365.2.
DR AlphaFoldDB; B9T842; -.
DR STRING; 3988.B9T842; -.
DR GeneID; 8261011; -.
DR KEGG; rcu:8261011; -.
DR eggNOG; KOG1539; Eukaryota.
DR InParanoid; B9T842; -.
DR OrthoDB; 5477616at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR024977; Apc4-like_WD40_dom.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007319; SSU_processome_Utp21.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22840; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR PANTHER; PTHR22840:SF12; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR Pfam; PF12894; ANAPC4_WD40; 1.
DR Pfam; PF04192; Utp21; 1.
DR Pfam; PF00400; WD40; 3.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 10.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 190..276
FT /note="Anaphase-promoting complex subunit 4-like WD40"
FT /evidence="ECO:0000259|Pfam:PF12894"
FT REPEAT 220..262
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 264..295
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 470..504
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 553..586
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 690..902
FT /note="Small-subunit processome Utp21"
FT /evidence="ECO:0000259|Pfam:PF04192"
FT REGION 654..676
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 906 AA; 101520 MW; C81C32F91A1AB787 CRC64;
MGIFEPFRAI GYITTSVPFS VQRLGTETFV TVSVGKAFQV YNCAKLNLVL VSPQLPHKIR
ALASYRDFTF AAYANHIAVF KRSQQVATWS RHSAKVNLLL LFGDHIISVD VNGNMFIWGF
KGIENNLAPI GHIMLDNNFT PTCLMHPDTY LNKVVVGSQE GTLQLWNIST KKKLYEFKGW
NSGITSCVSS PALDVIAVGC ADGKIHVHNI QCDDELVTFS HSTRGAVTAL CFSTDGQPLL
ASGSSSGVIS IWNLEKRRLQ TVIREAHDNS IISLHFFANE PVLMSGSADN SIKMWIFDTT
DGDPRLLRFR SGHSAPPHCI RFYANGRHIL SAGQDRAFRL FSIIQDQQSR ELSQRHISKR
AKKLRLKEEE LKLKPVIAFD CAEIRERDWC NVVTCHMDTA QAYVWRLQNF VLGEHILRPC
PENPTPVKAC TISACGNFAV IGTAGGWIER FNLQSGISRG SYVDVSEKSS CAHEGEVVGV
ACDSTNTLMI SAGYHGDVKV WDFKGLELKS RWEVGCSLVQ IVYHRLNGLL ATVADDLVIR
LFDVVALRMV RKFEGHTDRV TDLCFSEDGK WLLSSSMDGT LRIWDVILAR QIDAIHVDVP
ITALSLSQNL DILATTHVDQ NGVYLWVNQS MFSGVSSVDS YASGKEVVSV KMPSVSSVEG
SEAQDSDKPT MQPTQYDGAS HLPVFNQQMP ELVTLSLLPR SQWQGLINLD IIKVRNKPIE
PPKKPENAPF FLPSIPSLSG EILFKPSETM NEEKNTSADV EEHNHRHVDL PPSQFLQLLQ
SSAKMENFSA FTDYIKGLSP STLDLELRML QIIDDDGQLE KRPEFLAIEL LLDYFIHEIS
CRNNFEFVQA IIRLFLKIHG ETIRCQSKLQ DKARKLLDAQ CAVWQRVDKL FQSTRCMVTF
LSNSQF
//
