ID B9TC22_RICCO Unreviewed; 260 AA.
AC B9TC22;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=HTH-type transcriptional regulator malR, putative {ECO:0000313|EMBL:EEF26591.1};
DE EC=5.1.1.1 {ECO:0000313|EMBL:EEF26591.1};
GN ORFNames=RCOM_0293780 {ECO:0000313|EMBL:EEF26591.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
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DR EMBL; EQ976944; EEF26591.1; -; Genomic_DNA.
DR AlphaFoldDB; B9TC22; -.
DR STRING; 3988.B9TC22; -.
DR InParanoid; B9TC22; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0008784; F:alanine racemase activity; IEA:UniProtKB-EC.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd01545; PBP1_SalR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF109; TRANSCRIPTIONAL REGULATOR LACI_GALR-LIKE SENSOR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Isomerase {ECO:0000313|EMBL:EEF26591.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 78..234
FT /note="Transcriptional regulator LacI/GalR-like sensor"
FT /evidence="ECO:0000259|Pfam:PF13377"
FT REGION 235..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 236..253
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 260 AA; 27716 MW; A97636C9B93AB4FA CRC64;
MVEEIALDRE TDVAMLDAML RTTRLDGVIL SPPVTDHEPV LEKLKAQRIP FIRIAPLTNK
HRSPQISADD SAGARAIARH LWGLGHRRIG FIAGPVGHSA SHLRQQGFID ELMACGLDRK
AVSLAEGDFS FASGMAAGIL LLGKKPRVTA IFAANDDMAA GVIAAAARLG VRVPEDLSVA
GFDDSPVATL VWPPITTVRQ PIVEMAAAAA ELLIGEGTAP AKPFGVELIE RRSTGVSPEI
VREPRDSARP ARARKKAVQP
//
