ID C1MR89_MICPC Unreviewed; 792 AA.
AC C1MR89;
DT 26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT 26-MAY-2009, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EEH57841.1};
GN ORFNames=MICPUCDRAFT_45481 {ECO:0000313|EMBL:EEH57841.1};
OS Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga).
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Mamiellaceae; Micromonas.
OX NCBI_TaxID=564608 {ECO:0000313|Proteomes:UP000001876};
RN [1] {ECO:0000313|EMBL:EEH57841.1, ECO:0000313|Proteomes:UP000001876}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1545 {ECO:0000313|EMBL:EEH57841.1,
RC ECO:0000313|Proteomes:UP000001876};
RX PubMed=19359590; DOI=10.1126/science.1167222;
RA Worden A.Z., Lee J.H., Mock T., Rouze P., Simmons M.P., Aerts A.L.,
RA Allen A.E., Cuvelier M.L., Derelle E., Everett M.V., Foulon E.,
RA Grimwood J., Gundlach H., Henrissat B., Napoli C., McDonald S.M.,
RA Parker M.S., Rombauts S., Salamov A., Von Dassow P., Badger J.H.,
RA Coutinho P.M., Demir E., Dubchak I., Gentemann C., Eikrem W., Gready J.E.,
RA John U., Lanier W., Lindquist E.A., Lucas S., Mayer K.F., Moreau H.,
RA Not F., Otillar R., Panaud O., Pangilinan J., Paulsen I., Piegu B.,
RA Poliakov A., Robbens S., Schmutz J., Toulza E., Wyss T., Zelensky A.,
RA Zhou K., Armbrust E.V., Bhattacharya D., Goodenough U.W., Van de Peer Y.,
RA Grigoriev I.V.;
RT "Green evolution and dynamic adaptations revealed by genomes of the marine
RT picoeukaryotes Micromonas.";
RL Science 324:268-272(2009).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; GG663738; EEH57841.1; -; Genomic_DNA.
DR RefSeq; XP_003057890.1; XM_003057844.1.
DR AlphaFoldDB; C1MR89; -.
DR STRING; 564608.C1MR89; -.
DR GeneID; 9683699; -.
DR KEGG; mpp:MICPUCDRAFT_45481; -.
DR eggNOG; KOG1051; Eukaryota.
DR OMA; EFMEPHT; -.
DR OrthoDB; 35211at2759; -.
DR Proteomes; UP000001876; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF185; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 1.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|RuleBase:RU004432};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000001876};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 49..203
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 518..735
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT REGION 1..41
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 792 AA; 85108 MW; FE4347C1ACE64E41 CRC64;
MRASSLALGA SSHVAPGARA LHREPPAPRR ARHAARRRGV GVAPPRAMFD RFDGDAVNAV
KDGMDEAKKL RQSVISTEHL LLAIARQRND TSSAMHRAGA TEDAIRKACA KRAGISELEL
MNPFKQTGKT ADGLLPLSDD VKRLFERVAT EAEAKTGDAQ VTTKELALAM ISDVTCGART
VLEDDLDCDL GALKNEIDGA KKELVGAGKK LGKKKKGSAL AECGVDLTAD ARAGKLDPVV
GRDEEVDRIL RILVRRRKSN PCLVGDPGVG KTAIAEGLAR LIVAGDVPER LKNKRVISLQ
LGLLLANTKY RGEFEERLKN VIEEVKAAAD IILFVDELHM LVGAGGTGED GGMDAGNLMK
PALARGELQC IGATTIEEYR KHIEKDAALE RRFQPVRIGE PSPAASLEIL NGLKETYEAH
HGVTYDDDAL PAAVRLSTRY ITDRFLPDKA IDVIDEAGAM VQLRASASAA GGGVADVVVD
ASHVADVVAQ WTGVPVQQLS EDESKTLLNI EGALSKRVIG QTEAVKAISR AVRRARSGLA
DGGRPVASMI FAGPTGVGKT ELAKAVASSY YGAEKAMVRI DMSEYMESFA VSRLVGPPPG
YVGYQEGGQL TEAVRRNPHT LVLLDEIEKA HPDVFNVLLQ VLEDGRLTDS KGRTVDFTNA
MLVMTSNVGS KAILNSIDAS VDGDAASDAA AYRQVQADVR RELQVTYRPE FLNRLDEIIV
FQPLTRAEVG SIAELMLESV RGRVVGRGVT LAVDDAFRDL LLSEGFSPKF GARPMRRTVQ
RLLENPLSEA TR
//
