ID C2F962_LACPA Unreviewed; 185 AA.
AC C2F962;
DT 16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT 16-JUN-2009, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI69605.1};
GN ORFNames=HMPREF0530_0120 {ECO:0000313|EMBL:EEI69605.1};
OS Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM
OS 8130.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lacticaseibacillus.
OX NCBI_TaxID=525337 {ECO:0000313|EMBL:EEI69605.1, ECO:0000313|Proteomes:UP000003495};
RN [1] {ECO:0000313|EMBL:EEI69605.1, ECO:0000313|Proteomes:UP000003495}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25302 {ECO:0000313|EMBL:EEI69605.1,
RC ECO:0000313|Proteomes:UP000003495};
RA Qin X., Bachman B., Battles P., Bell A., Bess C., Bickham C., Chaboub L.,
RA Chen D., Coyle M., Deiros D.R., Dinh H., Forbes L., Fowler G.,
RA Francisco L., Fu Q., Gubbala S., Hale W., Han Y., Hemphill L.,
RA Highlander S.K., Hirani K., Hogues M., Jackson L., Jakkamsetti A.,
RA Javaid M., Jiang H., Korchina V., Kovar C., Lara F., Lee S., Mata R.,
RA Mathew T., Moen C., Morales K., Munidasa M., Nazareth L., Ngo R.,
RA Nguyen L., Okwuonu G., Ongeri F., Patil S., Petrosino J., Pham C., Pham P.,
RA Pu L.-L., Puazo M., Raj R., Reid J., Rouhana J., Saada N., Shang Y.,
RA Simmons D., Thornton R., Warren J., Weissenberger G., Zhang J., Zhang L.,
RA Zhou C., Zhu D., Muzny D., Worley K., Gibbs R.;
RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEI69605.1}.
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DR EMBL; ACGY01000006; EEI69605.1; -; Genomic_DNA.
DR RefSeq; WP_003662474.1; NZ_GG670156.1.
DR AlphaFoldDB; C2F962; -.
DR HOGENOM; CLU_066192_2_2_9; -.
DR Proteomes; UP000003495; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR46558:SF4; TRACRIPTIONAL REGULATORY PROTEIN-RELATED; 1.
DR PANTHER; PTHR46558; TRACRIPTIONAL REGULATORY PROTEIN-RELATED-RELATED; 1.
DR Pfam; PF13560; HTH_31; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:EEI69605.1};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 102..120
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 132..150
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 156..177
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 185 AA; 20734 MW; 67D86F8DB97BC353 CRC64;
MSDLSLGSRL KQLRKARGMT QSQLADDLFV SRKTVSSWET GRNQPDLQTI CRLASYYQLT
VDDLLHQQSV PHADDQRAIT WLGPALAIIL MGRLGFVALP EMLVLSDVVV IALAWLLVSW
WQRYMHLRTI RWACSLLAVT FIVAAGLNLF KMDFGLQLIY LAAAVTLLIP IAGTALIKKI
RSRPT
//
