ID C3SR67_ECOLX Unreviewed; 329 AA.
AC C3SR67; A0A380B2Y7;
DT 16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT 16-JUN-2009, sequence version 1.
DT 27-MAR-2024, entry version 122.
DE RecName: Full=DNA-directed RNA polymerase subunit alpha {ECO:0000256|ARBA:ARBA00015972, ECO:0000256|HAMAP-Rule:MF_00059};
DE Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418, ECO:0000256|HAMAP-Rule:MF_00059};
DE AltName: Full=RNA polymerase subunit alpha {ECO:0000256|ARBA:ARBA00033070, ECO:0000256|HAMAP-Rule:MF_00059};
DE AltName: Full=Transcriptase subunit alpha {ECO:0000256|ARBA:ARBA00032524, ECO:0000256|HAMAP-Rule:MF_00059};
GN Name=rpoA {ECO:0000256|HAMAP-Rule:MF_00059,
GN ECO:0000313|EMBL:ART26427.1};
GN ORFNames=A5U30_004529 {ECO:0000313|EMBL:EFM8156805.1}, A8502_004046
GN {ECO:0000313|EMBL:EFK3895296.1}, A9X72_02300
GN {ECO:0000313|EMBL:AVU64171.1}, ACN81_25405
GN {ECO:0000313|EMBL:OKU14758.1}, ACU57_21075
GN {ECO:0000313|EMBL:KPO07031.1}, AM464_09105
GN {ECO:0000313|EMBL:AWS63044.1}, AW118_24785
GN {ECO:0000313|EMBL:OTE55957.1}, AWP47_12760
GN {ECO:0000313|EMBL:OKV11608.1}, B6R15_004092
GN {ECO:0000313|EMBL:EFM7862770.1}, B6R31_004991
GN {ECO:0000313|EMBL:EGD0651211.1}, BCB93_004270
GN {ECO:0000313|EMBL:EFI6954578.1}, BER14_25075
GN {ECO:0000313|EMBL:PDV42417.1}, BF481_004953
GN {ECO:0000313|EMBL:EFI1484448.1}, BG944_001110
GN {ECO:0000313|EMBL:EFI0211997.1}, BGM66_003616
GN {ECO:0000313|EMBL:EFH0367134.1}, BJI68_08790
GN {ECO:0000313|EMBL:OIZ69992.1}, BJJ90_02240
GN {ECO:0000313|EMBL:APT00926.1}, BK292_20390
GN {ECO:0000313|EMBL:OJM89765.1}, BK383_24760
GN {ECO:0000313|EMBL:OJR50670.1}, BTB68_004379
GN {ECO:0000313|EMBL:EFF8956338.1}, BTQ06_10575
GN {ECO:0000313|EMBL:PAU23740.1}, BvCmsKKP061_03007
GN {ECO:0000313|EMBL:GDH47838.1}, BvCmsSIP010_02662
GN {ECO:0000313|EMBL:GDV26614.1}, BXT93_05590
GN {ECO:0000313|EMBL:ONG35951.1}, C0P57_002645
GN {ECO:0000313|EMBL:EFB4533386.1}, C1Q91_004927
GN {ECO:0000313|EMBL:EFA9848422.1}, C2121_004185
GN {ECO:0000313|EMBL:EFA9670801.1}, C2R31_004610
GN {ECO:0000313|EMBL:EFA8786676.1}, C3F40_19835
GN {ECO:0000313|EMBL:AUY03822.1}, C9E67_02840
GN {ECO:0000313|EMBL:QCL46227.1}, C9Z68_22520
GN {ECO:0000313|EMBL:TJQ09001.1}, CA593_09765
GN {ECO:0000313|EMBL:ARR33374.1}, CF22_004872
GN {ECO:0000313|EMBL:EFM0518758.1}, CG692_20300
GN {ECO:0000313|EMBL:OZP06403.1}, CG704_20985
GN {ECO:0000313|EMBL:OZO76974.1}, CG831_003626
GN {ECO:0000313|EMBL:EFE5124380.1}, CIG67_10790
GN {ECO:0000313|EMBL:RVE13583.1}, CQ986_004904
GN {ECO:0000313|EMBL:EFC5414191.1}, CR538_02535
GN {ECO:0000313|EMBL:AUJ99383.1}, CR539_21785
GN {ECO:0000313|EMBL:AUJ97727.1}, CR628_001343
GN {ECO:0000313|EMBL:EFC8019268.1}, CTR35_003607
GN {ECO:0000313|EMBL:EFC3526409.1}, CV83915_02803
GN {ECO:0000313|EMBL:ATZ33113.1}, CY655_21205
GN {ECO:0000313|EMBL:AZZ28381.1}, D1912_27640
GN {ECO:0000313|EMBL:RIC82427.1}, D3G36_23165
GN {ECO:0000313|EMBL:EFA4420706.1}, D4M65_20540
GN {ECO:0000313|EMBL:TXW73079.1}, D4N09_20140
GN {ECO:0000313|EMBL:TXU32127.1}, D9D43_22665
GN {ECO:0000313|EMBL:MGE16337.1}, D9E49_05125
GN {ECO:0000313|EMBL:MIB59801.1}, D9J61_16620
GN {ECO:0000313|EMBL:EAC1533635.1}, DD762_23515
GN {ECO:0000313|EMBL:PWH57039.1}, DIV22_15290
GN {ECO:0000313|EMBL:PZZ67135.1}, DNQ45_03725
GN {ECO:0000313|EMBL:PZT67557.1}, DNX30_25510
GN {ECO:0000313|EMBL:MJL96035.1}, DQ87_004799
GN {ECO:0000313|EMBL:EGP6255371.1}, DS732_24230
GN {ECO:0000313|EMBL:AXO09198.1}, DTL43_21030
GN {ECO:0000313|EMBL:RDA34773.1}, DU321_11970
GN {ECO:0000313|EMBL:RRL47188.1}, E4K51_21460
GN {ECO:0000313|EMBL:MQS32675.1}, E5H86_24555
GN {ECO:0000313|EMBL:EFC2248909.1}, E6D34_21790
GN {ECO:0000313|EMBL:EFC9751839.1}, EAI46_07445
GN {ECO:0000313|EMBL:RLY58985.1}, EC95NR1_02685
GN {ECO:0000313|EMBL:ART26427.1}, ECs4160 {ECO:0000313|EMBL:ACI76956.1},
GN EEP55_004515 {ECO:0000313|EMBL:EGO8705106.1}, EIA08_23925
GN {ECO:0000313|EMBL:RRD72009.1}, EIZ93_12500
GN {ECO:0000313|EMBL:MQK25121.1}, EN85_004372
GN {ECO:0000313|EMBL:EFL9839305.1}, EPS76_07245
GN {ECO:0000313|EMBL:RXD17074.1}, EPS97_20125
GN {ECO:0000313|EMBL:RXB25092.1}, EWK56_24965
GN {ECO:0000313|EMBL:RYL77681.1}, ExPECSC038_03663
GN {ECO:0000313|EMBL:GCO38575.1}, F7F11_22755
GN {ECO:0000313|EMBL:KAB0122068.1}, F7N46_24040
GN {ECO:0000313|EMBL:EFE8676130.1}, F9407_19325
GN {ECO:0000313|EMBL:EFH4948448.1}, F9413_21265
GN {ECO:0000313|EMBL:EFH4963026.1}, F9461_25685
GN {ECO:0000313|EMBL:EFH3676550.1}, F9B07_24715
GN {ECO:0000313|EMBL:MTE91949.1}, FEJ01_22545
GN {ECO:0000313|EMBL:EFD1613948.1}, FIJ20_21225
GN {ECO:0000313|EMBL:EFB2194691.1}, FJQ40_18275
GN {ECO:0000313|EMBL:EFB1699335.1}, FKO60_25605
GN {ECO:0000313|EMBL:TZE41292.1}, FOI11_019290
GN {ECO:0000313|EMBL:QOY30534.1}, FOI11_03890
GN {ECO:0000313|EMBL:MBA6239171.1}, FPI65_20275
GN {ECO:0000313|EMBL:NDR93555.1}, FPS11_25460
GN {ECO:0000313|EMBL:EFB3618189.1}, FV293_22495
GN {ECO:0000313|EMBL:TXQ30729.1}, FVB16_04840
GN {ECO:0000313|EMBL:MPU48192.1}, FZN31_02665
GN {ECO:0000313|EMBL:QHP97902.1}, FZU14_21790
GN {ECO:0000313|EMBL:EFD6886799.1}, G3V95_19815
GN {ECO:0000313|EMBL:NEM87704.1}, G3W53_20925
GN {ECO:0000313|EMBL:NEN72542.1}, G4A38_21480
GN {ECO:0000313|EMBL:NYQ41111.1}, G4A47_20750
GN {ECO:0000313|EMBL:NYP87589.1}, G5603_24555
GN {ECO:0000313|EMBL:NGE91297.1}, G8C01_22585
GN {ECO:0000313|EMBL:MBE9994092.1}, G9448_17105
GN {ECO:0000313|EMBL:QLA44640.1}, GAI89_24860
GN {ECO:0000313|EMBL:EFH6097822.1}, GAJ12_24750
GN {ECO:0000313|EMBL:EFH6168215.1}, GJ11_21355
GN {ECO:0000313|EMBL:ANO91215.1}, GKF66_21515
GN {ECO:0000313|EMBL:MSI71337.1}, GNW61_16600
GN {ECO:0000313|EMBL:EFH6650350.1}, GOP25_22675
GN {ECO:0000313|EMBL:EFH5894993.1}, GP711_23275
GN {ECO:0000313|EMBL:KAE9728182.1}, GP954_00975
GN {ECO:0000313|EMBL:MWT83773.1}, GP975_01155
GN {ECO:0000313|EMBL:MWR36725.1}, GP979_02035
GN {ECO:0000313|EMBL:MWR87115.1}, GQA06_03980
GN {ECO:0000313|EMBL:MWR12969.1}, GQM04_10535
GN {ECO:0000313|EMBL:MWL45947.1}, GQM13_25170
GN {ECO:0000313|EMBL:MWL06691.1}, GQM21_11200
GN {ECO:0000313|EMBL:MWK97751.1}, GQN34_23235
GN {ECO:0000313|EMBL:MWP26943.1}, GQW07_21580
GN {ECO:0000313|EMBL:EFH3510169.1}, GRC73_21780
GN {ECO:0000313|EMBL:HAH4526594.1}, GRO95_20845
GN {ECO:0000313|EMBL:EFH3411102.1}, GRW05_09030
GN {ECO:0000313|EMBL:MXI74414.1}, GRW24_04785
GN {ECO:0000313|EMBL:MXJ07804.1}, GRW56_00265
GN {ECO:0000313|EMBL:MXG80633.1}, GRW57_03570
GN {ECO:0000313|EMBL:MXH39431.1}, GTP92_23225
GN {ECO:0000313|EMBL:EGO6681186.1}, GUC01_21150
GN {ECO:0000313|EMBL:NAG21505.1}, H0O72_19385
GN {ECO:0000313|EMBL:NZD15695.1}, HCQ42_003955
GN {ECO:0000313|EMBL:EFM2063502.1}, HEP30_018605
GN {ECO:0000313|EMBL:MBB2468096.1}, HEP34_004777
GN {ECO:0000313|EMBL:EFM1448332.1}, HHH44_004542
GN {ECO:0000313|EMBL:HAH1421082.1}, HI055_004133
GN {ECO:0000313|EMBL:HAI2143714.1}, HIE29_005180
GN {ECO:0000313|EMBL:HAH7771620.1}, HJQ60_005018
GN {ECO:0000313|EMBL:HAI5334923.1}, HLX92_10105
GN {ECO:0000313|EMBL:MBA1886528.1}, HLZ50_22210
GN {ECO:0000313|EMBL:HAJ5152717.1}, HMV95_19575
GN {ECO:0000313|EMBL:HAJ5960438.1}, HV109_02220
GN {ECO:0000313|EMBL:QLY95546.1}, HV146_21640
GN {ECO:0000313|EMBL:QLX46490.1}, HV209_14745
GN {ECO:0000313|EMBL:MBA7719844.1}, HVV39_09235
GN {ECO:0000313|EMBL:QMS38185.1}, HVW04_17565
GN {ECO:0000313|EMBL:QMP46557.1}, HVW43_18700
GN {ECO:0000313|EMBL:QMO42219.1}, HVY77_02205
GN {ECO:0000313|EMBL:QMF65947.1}, HVZ29_19065
GN {ECO:0000313|EMBL:QLN20796.1}, HX086_19375
GN {ECO:0000313|EMBL:MDM1662703.1}, HX136_02225
GN {ECO:0000313|EMBL:QLG55814.1}, I0E88_004524
GN {ECO:0000313|EMBL:HBC2921197.1}, I4I37_17235
GN {ECO:0000313|EMBL:MBF9178022.1}, I6H00_20955
GN {ECO:0000313|EMBL:QPR13766.1}, I6H02_11960
GN {ECO:0000313|EMBL:QPR07003.1}, IFB95_004799
GN {ECO:0000313|EMBL:HAN4315874.1}, IUC12_004867
GN {ECO:0000313|EMBL:EGO5106978.1}, J0541_004390
GN {ECO:0000313|EMBL:HBB1575389.1}, JNP96_25275
GN {ECO:0000313|EMBL:QRZ97036.1}, KV259_004365
GN {ECO:0000313|EMBL:EHS3288172.1}, KV317_004337
GN {ECO:0000313|EMBL:EHS3598252.1}, KV371_004351
GN {ECO:0000313|EMBL:EHS3810497.1}, KV406_004344
GN {ECO:0000313|EMBL:EHS3999423.1}, KV449_004379
GN {ECO:0000313|EMBL:EHS4170237.1}, KV455_004342
GN {ECO:0000313|EMBL:EHS4135850.1}, KV463_004364
GN {ECO:0000313|EMBL:EHS4175389.1}, KV469_004357
GN {ECO:0000313|EMBL:EHS4180557.1}, KV499_004428
GN {ECO:0000313|EMBL:EHS4295903.1}, KV500_004315
GN {ECO:0000313|EMBL:EHS4315782.1}, NCTC10082_02846
GN {ECO:0000313|EMBL:STE04435.1}, NCTC10089_00509
GN {ECO:0000313|EMBL:VTR12696.1}, NCTC10090_03534
GN {ECO:0000313|EMBL:STM05237.1}, NCTC10418_00698
GN {ECO:0000313|EMBL:STE83065.1}, NCTC10767_01523
GN {ECO:0000313|EMBL:STC77973.1}, NCTC10865_00668
GN {ECO:0000313|EMBL:STI15458.1}, NCTC10974_00559
GN {ECO:0000313|EMBL:VFT67136.1}, NCTC11126_02779
GN {ECO:0000313|EMBL:SPW45514.1}, NCTC11181_02745
GN {ECO:0000313|EMBL:STD42296.1}, NCTC11341_01882
GN {ECO:0000313|EMBL:STH70321.1}, NCTC12950_00486
GN {ECO:0000313|EMBL:STP40896.1}, NCTC13148_03434
GN {ECO:0000313|EMBL:STL84447.1}, NCTC4450_02482
GN {ECO:0000313|EMBL:CAD7362794.1}, NCTC7927_00558
GN {ECO:0000313|EMBL:STF91906.1}, NCTC7928_02508
GN {ECO:0000313|EMBL:STF41884.1}, NCTC8009_01520
GN {ECO:0000313|EMBL:SQD01109.1}, NCTC8179_05950
GN {ECO:0000313|EMBL:STL04049.1}, NCTC8333_00496
GN {ECO:0000313|EMBL:STM21656.1}, NCTC8500_00344
GN {ECO:0000313|EMBL:STM36649.1}, NCTC8621_00515
GN {ECO:0000313|EMBL:STH80639.1}, NCTC8622_00499
GN {ECO:0000313|EMBL:STI81557.1}, NCTC8959_03254
GN {ECO:0000313|EMBL:STE12501.1}, NCTC8960_03077
GN {ECO:0000313|EMBL:STN12779.1}, NCTC9044_01349
GN {ECO:0000313|EMBL:VED08444.1}, NCTC9077_00611
GN {ECO:0000313|EMBL:STJ09010.1}, NCTC9081_00926
GN {ECO:0000313|EMBL:STJ15573.1}, NCTC9117_00762
GN {ECO:0000313|EMBL:STJ78241.1}, NCTC9702_00544
GN {ECO:0000313|EMBL:VED32966.1}, NCTC9706_02744
GN {ECO:0000313|EMBL:STN85655.1}, NEP60_26260
GN {ECO:0000313|EMBL:MDI0698662.1}, O5851_12360
GN {ECO:0000313|EMBL:MCZ5094416.1}, RG28_21580
GN {ECO:0000313|EMBL:APJ78686.1}, SAMEA3752557_01945
GN {ECO:0000313|EMBL:SQP81730.1}, TUM18780_04420
GN {ECO:0000313|EMBL:BCG35280.1}, WR15_19575
GN {ECO:0000313|EMBL:KNF65551.1};
OS Escherichia coli.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=562 {ECO:0000313|EMBL:ACI76956.1};
RN [1] {ECO:0000313|EMBL:ACI76956.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=493/89 {ECO:0000313|EMBL:ACI76956.1}, and 86-24
RC {ECO:0000313|EMBL:ACI76957.1};
RX PubMed=19439656; DOI=10.1073/pnas.0812949106;
RA Leopold S.R., Magrini V., Holt N.J., Shaikh N., Mardis E.R., Cagno J.,
RA Ogura Y., Iguchi A., Hayashi T., Mellmann A., Karch H., Besser T.E.,
RA Sawyer S.A., Whittam T.S., Tarr P.I.;
RT "A precise reconstruction of the emergence and constrained radiations of
RT Escherichia coli O157 portrayed by backbone concatenomic analysis.";
RL Proc. Natl. Acad. Sci. U.S.A. 106:8713-8718(2009).
RN [2] {ECO:0000313|EMBL:APJ78686.1, ECO:0000313|Proteomes:UP000184379}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C5 {ECO:0000313|EMBL:APJ78686.1,
RC ECO:0000313|Proteomes:UP000184379};
RA Jiang J., Xu Z., Zhou Y., Zhao H., Leung F.C.C.;
RT "Vertical and Horizontal Evolutionary Story implied from E. coli complete
RT genomes.";
RL Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KPO07031.1, ECO:0000313|Proteomes:UP000050556}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AW1.3 {ECO:0000313|EMBL:KPO07031.1,
RC ECO:0000313|Proteomes:UP000050556};
RX PubMed=26441869; DOI=10.3389/fmicb.2015.00932;
RA Mercer R.G., Zheng J., Garcia-Hernandez R., Ruan L., Ganzle M.G.,
RA McMullen L.M.;
RT "Genetic determinants of heat resistance in Escherichia coli.";
RL Front. Microbiol. 6:932-932(2015).
RN [4] {ECO:0000313|EMBL:KNF65551.1, ECO:0000313|Proteomes:UP000037564}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFSAN026843 {ECO:0000313|EMBL:KNF65551.1,
RC ECO:0000313|Proteomes:UP000037564};
RA Gonzalez-Escalona N., Toro M., Timme R., Payne J.;
RT "Genome sequences of 64 non-O157:H7 Shiga toxin-producing Escherichia coli
RT strains.";
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:PDV42417.1, ECO:0000313|Proteomes:UP000220499}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OLC1334 {ECO:0000313|EMBL:PDV42417.1,
RC ECO:0000313|Proteomes:UP000220499};
RX PubMed=28221970; DOI=.4315/0362-028X.JFP-16-220;
RA Knowles M., Stinson S., Lambert D., Carrillo C., Koziol A., Gauthier M.,
RA Blais B.;
RT "Genomic Tools for Customized Recovery and Detection of Foodborne Shiga
RT Toxigenic Escherichia coli.";
RL J. Food Prot. 79:2066-2077(2016).
RN [6] {ECO:0000313|EMBL:ANO91215.1, ECO:0000313|Proteomes:UP000092566}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=06-00048 {ECO:0000313|EMBL:ANO91215.1,
RC ECO:0000313|Proteomes:UP000092566};
RA Timme R., Allard M.W., Strain E., Evans P.S., Lorenz S., Brown E.;
RT "Whole genome shotgun sequencing of cultured foodborne pathogen.";
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|EMBL:APT00926.1, ECO:0000313|Proteomes:UP000185422}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SLK172 {ECO:0000313|EMBL:APT00926.1,
RC ECO:0000313|Proteomes:UP000185422};
RA Bai L., Wang J., Hurley D., Yu Z., Wang L., Chen Q., Li J., Li F.,
RA Fanning S.;
RT "Characterisation of two large plasmids containing ESBL genes; a novel
RT disrupted mcr-1 gene and a lysogenized phage P-1 like sequence, cultured
RT from a human atypical enteropathogenic Escherichia coli (aEPEC) recovered
RT in China.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
RN [8] {ECO:0000313|Proteomes:UP000184277, ECO:0000313|Proteomes:UP000184369}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=570 {ECO:0000313|EMBL:OJR50670.1,
RC ECO:0000313|Proteomes:UP000184277}, and 634
RC {ECO:0000313|EMBL:OJM89765.1, ECO:0000313|Proteomes:UP000184369};
RA Wang Y., Zhang R., Li J., Wu Z., Wenjuan Y., Schwarz S., Tyrrell J.,
RA Zheng Y., Wang S., Shen Z., Liu Z., Lei L., Li M., Zhang Q., Wu C.,
RA Zhang Q., Wu Y., Walsh T., Shen J.;
RT "Comprehensive resistome analysis reveals the prevalence of NDM and MCR-1
RT in Chinese poultry production.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
RN [9] {ECO:0000313|EMBL:OIZ69992.1, ECO:0000313|Proteomes:UP000183429}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MN067 {ECO:0000313|EMBL:OIZ69992.1,
RC ECO:0000313|Proteomes:UP000183429};
RA Nagarjuna D., Yadav M.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
RN [10] {ECO:0000313|EMBL:PAU23740.1, ECO:0000313|Proteomes:UP000218543}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=STEC 514-2 {ECO:0000313|EMBL:PAU23740.1,
RC ECO:0000313|Proteomes:UP000218543};
RA Ferdous M., Moran-Gilad J., Rossen J.W., Gdalevich M.;
RT "Real-Time Genomic Investigation Underlying the Public Health Response to a
RT Shiga Toxin-Producing Escherichia Coli O26:H11 Outbreak in a Nursery.";
RL Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
RN [11] {ECO:0000313|Proteomes:UP000185794, ECO:0000313|Proteomes:UP000186275}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=700324 {ECO:0000313|EMBL:OKV11608.1,
RC ECO:0000313|Proteomes:UP000185794}, and 703098
RC {ECO:0000313|EMBL:OKU14758.1, ECO:0000313|Proteomes:UP000186275};
RA Del Canto F., Vidal R., Stine O.C., Pop M.;
RT "Chaperone-usher pili loci of human colonization factor-negative
RT enterotoxigenic Escherichia coli.";
RL Front. Cell. Infect. Microbiol. 0:0-0(2017).
RN [12] {ECO:0000313|EMBL:ONG35951.1, ECO:0000313|Proteomes:UP000188967}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ICBEcBL-II-13 {ECO:0000313|EMBL:ONG35951.1,
RC ECO:0000313|Proteomes:UP000188967};
RA Moura Q., Fernandes M.R., Cerdeira L., Vianello M., Souza T.A., Ienne S.,
RA Lincopan N.;
RT "Draft genome sequence of an E. coli strain isolated from human, in Amazon,
RT Brazil.";
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
RN [13] {ECO:0000313|EMBL:OTE55957.1, ECO:0000313|Proteomes:UP000194376}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OLC1269 {ECO:0000313|EMBL:OTE55957.1,
RC ECO:0000313|Proteomes:UP000194376};
RA Carrillo C.D., Koziol A.G., Mathews A., Goji N., Lambert D.,
RA Huszczynski G., Deschenes M., Gauthier M., Amoako K., Blais B.;
RT "Application of genomics in the determination of verotoxigenic Escherichia
RT coli toxin subtypes.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
RN [14] {ECO:0000313|EMBL:AVU64171.1, ECO:0000313|Proteomes:UP000325046}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=190 {ECO:0000313|EMBL:AVU64171.1,
RC ECO:0000313|Proteomes:UP000325046};
RA Hoffmann M., Sanchez M., Timme R., Bry L.;
RT "Whole genome sequencing of cultured foodborne pathogen.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
RN [15] {ECO:0000313|EMBL:ARR33374.1, ECO:0000313|Proteomes:UP000194199}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=5CRE51 {ECO:0000313|EMBL:ARR33374.1,
RC ECO:0000313|Proteomes:UP000194199};
RA Mu J.-J., Lin Y.-C.;
RT "Coexistence of MCR-1 and NDM-9 in Escherichia coli clinical isolate in
RT Taiwan.";
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
RN [16] {ECO:0000313|EMBL:ART26427.1, ECO:0000313|Proteomes:UP000250208}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=95NR1 {ECO:0000313|EMBL:ART26427.1,
RC ECO:0000313|Proteomes:UP000250208};
RA Forde B.M., McAllister L.J., Paton J.C., Paton A.W., Beatson S.A.;
RT "PacBio sequencing reveals differential patterns of methylation in wo
RT O111:H- Shiga toxigenic Escherichia coli isolates from a historic hemplytic
RT uremic syndrome outbrerak in Australia.";
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
RN [17] {ECO:0000313|Proteomes:UP000264871, ECO:0000313|Proteomes:UP000264872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WW38 {ECO:0000313|EMBL:OZP06403.1,
RC ECO:0000313|Proteomes:UP000264872}, and WW601
RC {ECO:0000313|EMBL:OZO76974.1, ECO:0000313|Proteomes:UP000264871};
RA Zhi S., Banting G., Neumann N.;
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
RN [18] {ECO:0000313|EMBL:RVE13583.1, ECO:0000313|Proteomes:UP000288459}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCPM 6219 {ECO:0000313|EMBL:RVE13583.1,
RC ECO:0000313|Proteomes:UP000288459};
RA Liu S.-L., Zhou Y.-J., Zhao M.-F.;
RT "Sequencing of Escherichia coli CCPM 6219.";
RL Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
RN [19] {ECO:0000313|EMBL:PDV42417.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=OLC1334 {ECO:0000313|EMBL:PDV42417.1};
RA Ehlers B., Leendertz F.H.;
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
RN [20] {ECO:0000313|Proteomes:UP000234238, ECO:0000313|Proteomes:UP000234543}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=14EC029 {ECO:0000313|EMBL:AUJ99383.1,
RC ECO:0000313|Proteomes:UP000234238}, and 14EC033
RC {ECO:0000313|EMBL:AUJ97727.1, ECO:0000313|Proteomes:UP000234543};
RA Li B., Wang X.;
RT "mcr-1 positive E.coli isolates in China.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
RN [21] {ECO:0000313|EMBL:ATZ33113.1, ECO:0000313|Proteomes:UP000236551}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CV839-15 {ECO:0000313|EMBL:ATZ33113.1,
RC ECO:0000313|Proteomes:UP000236551};
RA Li Z., Song N., Li W., Philip H.R., Bu Z., Siguo L.;
RT "Escherichia coli CV839-15 Genome sequencing and assembly.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
RN [22] {ECO:0000313|EMBL:AZZ28381.1, ECO:0000313|Proteomes:UP000284592}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E-1246 {ECO:0000313|EMBL:AZZ28381.1,
RC ECO:0000313|Proteomes:UP000284592};
RA Bikkarolla S.K., Nordberg V., Kabir M.H., Muller V., Fritzsche J.,
RA Ambjornsson T., Giske C.G., Naver L., Sandegren L., Westerlund F.;
RT "Combining optical DNA mapping and long-read sequencing for full genomic
RT characterization of plasmids in a nosocomial resistance outbreak.";
RL Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
RN [23] {ECO:0000313|EMBL:RIC82427.1, ECO:0000313|Proteomes:UP000283846}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S339 {ECO:0000313|EMBL:RIC82427.1,
RC ECO:0000313|Proteomes:UP000283846};
RA Geslain G., Birgy A., Adiba S., Magnan M., Courroux C., Levy C., Cohen R.,
RA Bidet P., Bonacorsi S.;
RT "Genome sequencing of strains of the most prevalent clonal group of
RT O1:K1:H7 Escherichia coli that causes neonatal meningitis in France.";
RL BMC Microbiol. 0:0-0(2018).
RN [24] {ECO:0000313|EMBL:HAH1421082.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=887_Uriselect {ECO:0000313|EMBL:HAN4315874.1}, AA002
RC {ECO:0000313|EMBL:HBC2921197.1}, AMC_487
RC {ECO:0000313|EMBL:HAI5334923.1}, BCW_4213
RC {ECO:0000313|EMBL:HAI2143714.1}, C0382
RC {ECO:0000313|EMBL:HAH7771620.1}, EC00763
RC {ECO:0000313|EMBL:HAH4526594.1}, ecoli[ST-219], Ecoli[ST-219]
RC {ECO:0000313|EMBL:HAJ5152717.1}, Escherichia coli
RC {ECO:0000313|EMBL:HBB1575389.1}, EuSCAPE_DE065
RC {ECO:0000313|EMBL:HAJ5960438.1}, and W1_5_ERB1
RC {ECO:0000313|EMBL:HAH1421082.1};
RX PubMed=30286803;
RA Souvorov A., Agarwala R., Lipman D.J.;
RT "SKESA: strategic k-mer extension for scrupulous assemblies.";
RL Genome Biol. 19:153-153(2018).
RN [25] {ECO:0000313|EMBL:AUY03822.1, ECO:0000313|Proteomes:UP000239554}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ECONIH4 {ECO:0000313|EMBL:AUY03822.1,
RC ECO:0000313|Proteomes:UP000239554};
RX PubMed=29437920;
RG NISC Comparative Sequencing Program;
RA Weingarten R.A., Johnson R.C., Conlan S., Ramsburg A.M., Dekker J.P.,
RA Lau A.F., Khil P., Odom R.T., Deming C., Park M., Thomas P.J.,
RA Henderson D.K., Palmore T.N., Segre J.A., Frank K.M.;
RT "Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of
RT Bacterial Plasmids Conferring Carbapenem Resistance.";
RL MBio 9:e02011-e02017(2018).
RN [26] {ECO:0000313|EMBL:AUY03822.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ECONIH4 {ECO:0000313|EMBL:AUY03822.1};
RG NISC Comparative Sequencing Program;
RA Weingarten R.A., Johnson R.C., Conlan S., Ramsburg A.M., Dekker J.P.,
RA Lau A.F., Khil P., Odom R.T., Deming C., Park M., Thomas P.J.,
RA Henderson D.K., Palmore T.N., Segre J.A., Frank K.M.;
RT "Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of
RT Bacterial Plasmids Conferring Carbapenem Resistance.";
RL MBio 9:0-0(2018).
RN [27] {ECO:0000313|EMBL:PWH57039.1, ECO:0000313|Proteomes:UP000245761}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B8S56 {ECO:0000313|EMBL:PWH57039.1,
RC ECO:0000313|Proteomes:UP000245761};
RA Xu A., Tilman S., Wisser-Parker K., Scullen O.J., Sommers C.;
RT "Draft Genomic Sequencing Of Potential Extraintestinal Pathogenic
RT Escherichia coli B8S56 Isolated from Retail Chicken Skin.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
RN [28] {ECO:0000313|Proteomes:UP000300554, ECO:0000313|Proteomes:UP000300926}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ECSC038 {ECO:0000313|EMBL:GCO38575.1,
RC ECO:0000313|Proteomes:UP000300926}, KK-P061
RC {ECO:0000313|EMBL:GDH47838.1, ECO:0000313|Proteomes:UP000303027}, and
RC SI-P010 {ECO:0000313|EMBL:GDV26614.1,
RC ECO:0000313|Proteomes:UP000300554};
RA Arimizu Y., Ogura Y.;
RT "Large scale genomics of bovine and human commensal E. coli to reveal the
RT emerging process of EHEC.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
RN [29] {ECO:0000313|EMBL:QCL46227.1, ECO:0000313|Proteomes:UP000298553}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=143 {ECO:0000313|EMBL:QCL46227.1,
RC ECO:0000313|Proteomes:UP000298553};
RA Bono J.L., Arthur T.M.;
RT "WGA of Escherichia coli O157:H7: comparison of multiple isolates.";
RL Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
RN [30] {ECO:0000313|EMBL:PZZ67135.1, ECO:0000313|Proteomes:UP000248865}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=14-391 {ECO:0000313|EMBL:PZZ67135.1,
RC ECO:0000313|Proteomes:UP000248865};
RA Karnisova L., Nunvar J., Marejkova M., Mellmann A., Drevinek P.,
RA Blahova K., Bielaszewska M.;
RT "Genomic sequencing of EHEC O26 New European Clone.";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
RN [31] {ECO:0000313|EMBL:AWS63044.1, ECO:0000313|Proteomes:UP000247477}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AR_0085 {ECO:0000313|EMBL:AWS63044.1,
RC ECO:0000313|Proteomes:UP000247477};
RA Conlan S., Thomas P.J., Mullikin J., Frank K.M., Segre J.A.;
RT "Whole genome sequencing of Escherichia coli AR_0085.";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
RN [32] {ECO:0000313|EMBL:PZT67557.1, ECO:0000313|Proteomes:UP000249482}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EcMLT {ECO:0000313|EMBL:PZT67557.1,
RC ECO:0000313|Proteomes:UP000249482};
RA Munoz M.E., Moura Q., Ventura P.R.M., Bustos L.R., Ovando B.G.,
RA Terrazas D.I.V., Yarhui N.B., Cerdeira L., Lincopan N.;
RT "Draft genome sequence of mcr-1-harboring Escherichia coli isolated from
RT wound infection of a hospitalized patient, in Bolivia.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [33] {ECO:0000313|Proteomes:UP000250561, ECO:0000313|Proteomes:UP000250671}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC10082 {ECO:0000313|EMBL:STE04435.1,
RC ECO:0000313|Proteomes:UP000255164}, NCTC10090
RC {ECO:0000313|EMBL:STM05237.1, ECO:0000313|Proteomes:UP000255259},
RC NCTC10418 {ECO:0000313|EMBL:STE83065.1,
RC ECO:0000313|Proteomes:UP000255460}, NCTC10767
RC {ECO:0000313|EMBL:STC77973.1, ECO:0000313|Proteomes:UP000254647},
RC NCTC10865 {ECO:0000313|EMBL:STI15458.1,
RC ECO:0000313|Proteomes:UP000254159}, NCTC11126
RC {ECO:0000313|EMBL:SPW45514.1, ECO:0000313|Proteomes:UP000250561},
RC NCTC11181 {ECO:0000313|EMBL:STD42296.1,
RC ECO:0000313|Proteomes:UP000254219}, NCTC11341
RC {ECO:0000313|EMBL:STH70321.1, ECO:0000313|Proteomes:UP000254428},
RC NCTC12950 {ECO:0000313|EMBL:STP40896.1,
RC ECO:0000313|Proteomes:UP000255454}, NCTC13148
RC {ECO:0000313|EMBL:STL84447.1, ECO:0000313|Proteomes:UP000254255},
RC NCTC7927 {ECO:0000313|EMBL:STF91906.1,
RC ECO:0000313|Proteomes:UP000254043}, NCTC7928
RC {ECO:0000313|EMBL:STF41884.1, ECO:0000313|Proteomes:UP000254877},
RC NCTC8009 {ECO:0000313|EMBL:SQD01109.1,
RC ECO:0000313|Proteomes:UP000250991}, NCTC8179
RC {ECO:0000313|EMBL:STL04049.1, ECO:0000313|Proteomes:UP000255543},
RC NCTC8333 {ECO:0000313|EMBL:STM21656.1,
RC ECO:0000313|Proteomes:UP000254718}, NCTC8500
RC {ECO:0000313|EMBL:STM36649.1, ECO:0000313|Proteomes:UP000254429},
RC NCTC8621 {ECO:0000313|EMBL:STH80639.1,
RC ECO:0000313|Proteomes:UP000255093}, NCTC8622
RC {ECO:0000313|EMBL:STI81557.1, ECO:0000313|Proteomes:UP000254079},
RC NCTC8959 {ECO:0000313|EMBL:STE12501.1,
RC ECO:0000313|Proteomes:UP000255118}, NCTC8960
RC {ECO:0000313|EMBL:STN12779.1, ECO:0000313|Proteomes:UP000255057},
RC NCTC9077 {ECO:0000313|EMBL:STJ09010.1,
RC ECO:0000313|Proteomes:UP000254495}, NCTC9081
RC {ECO:0000313|EMBL:STJ15573.1, ECO:0000313|Proteomes:UP000254716},
RC NCTC9117 {ECO:0000313|EMBL:STJ78241.1,
RC ECO:0000313|Proteomes:UP000254785}, NCTC9706
RC {ECO:0000313|EMBL:STN85655.1, ECO:0000313|Proteomes:UP000254460}, and
RC VREC0535 {ECO:0000313|EMBL:SQP81730.1,
RC ECO:0000313|Proteomes:UP000250671};
RG Pathogen Informatics;
RA Doyle S.;
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [34] {ECO:0000313|EMBL:RDA34773.1, ECO:0000313|Proteomes:UP000253687}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AVC211 {ECO:0000313|EMBL:RDA34773.1,
RC ECO:0000313|Proteomes:UP000253687};
RA Cummins M.L., Reid C.J., Roy Chowdhury P., Bushell R., Esbert N.,
RA Tivendale K.A., Noormohammadi A.H., Islam S., Marenda M.S., Browning G.F.,
RA Markham P.F., Djordjevic S.P.;
RT "Whole Genome Sequence Analysis of Avian Pathogenic E. coli - An Australian
RT Perspective.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
RN [35] {ECO:0000313|EMBL:AXO09198.1, ECO:0000313|Proteomes:UP000256244}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Cq9 {ECO:0000313|EMBL:AXO09198.1}, and cq9
RC {ECO:0000313|Proteomes:UP000256244};
RA Bai L.;
RT "Complete genome sequencing and genomic characterization of five
RT Escherichia coli strains co-producing MCR-1 and ESBLs from different
RT origins in China.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
RN [36] {ECO:0000313|Proteomes:UP000523924, ECO:0000313|Proteomes:UP000562788}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=155580 {ECO:0000313|EMBL:EFK3895296.1,
RC ECO:0000313|Proteomes:UP000523924}, 462023
RC {ECO:0000313|EMBL:MJL96035.1}, 470196 {ECO:0000313|EMBL:EFA9670801.1,
RC ECO:0000313|Proteomes:UP000562788}, 630667
RC {ECO:0000313|EMBL:EGO8705106.1}, 738634
RC {ECO:0000313|EMBL:EFD1613948.1, ECO:0000313|Proteomes:UP000562666},
RC 854900 {ECO:0000313|EMBL:EFH3510169.1,
RC ECO:0000313|Proteomes:UP000579110}, and 857239
RC {ECO:0000313|EMBL:EFH3411102.1, ECO:0000313|Proteomes:UP000572731};
RA Ashton P.M., Dallman T., Nair S., De Pinna E., Peters T., Grant K.;
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
RN [37] {ECO:0000313|Proteomes:UP000523388, ECO:0000313|Proteomes:UP000528504}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AZ-TG102963 {ECO:0000313|EMBL:EFA9848422.1,
RC ECO:0000313|Proteomes:UP000523388}, AZ-TG60901
RC {ECO:0000313|EMBL:EFM0518758.1, ECO:0000313|Proteomes:UP000528504},
RC AZ-TG73387 {ECO:0000313|EMBL:EGP6255371.1}, AZ-TG73583
RC {ECO:0000313|EMBL:EFL9839305.1, ECO:0000313|Proteomes:UP000543257},
RC CFSAN046653 {ECO:0000313|EMBL:EFI6954578.1}, Elk_RLE1_A7
RC {ECO:0000313|EMBL:EHS3288172.1}, Elk_RLE1_D5
RC {ECO:0000313|EMBL:EHS4170237.1}, Elk_RLE1_D7
RC {ECO:0000313|EMBL:EHS3598252.1}, Elk_RLE1_D8
RC {ECO:0000313|EMBL:EHS4295903.1}, Elk_RLE1_E7
RC {ECO:0000313|EMBL:EHS4175389.1}, Elk_RLE1_F6
RC {ECO:0000313|EMBL:EHS3999423.1}, Elk_RLE1_G8
RC {ECO:0000313|EMBL:EHS4135850.1}, Elk_RLE1_H7
RC {ECO:0000313|EMBL:EHS4180557.1}, Elk_RLE2_A10
RC {ECO:0000313|EMBL:EHS3810497.1}, Elk_RLE2_C11
RC {ECO:0000313|EMBL:EHS4315782.1}, MOD1-EC3652
RC {ECO:0000313|EMBL:EFI1484448.1, ECO:0000313|Proteomes:UP000585348},
RC MOD1-EC4555 {ECO:0000313|EMBL:EFC5414191.1,
RC ECO:0000313|Proteomes:UP000539823}, NC_STEC178
RC {ECO:0000313|EMBL:EGD0651211.1}, NC_STEC194
RC {ECO:0000313|EMBL:EFM7862770.1, ECO:0000313|Proteomes:UP000587626},
RC PSU-1190 {ECO:0000313|EMBL:EFA4420706.1,
RC ECO:0000313|Proteomes:UP000591371}, PSU-1847
RC {ECO:0000313|EMBL:EFB1699335.1, ECO:0000313|Proteomes:UP000533284},
RC PSU-1859 {ECO:0000313|EMBL:EFB3618189.1,
RC ECO:0000313|Proteomes:UP000543252}, PSU-2072
RC {ECO:0000313|EMBL:EFH6650350.1, ECO:0000313|Proteomes:UP000530628},
RC PSU-2243 {ECO:0000313|EMBL:EFH5894993.1,
RC ECO:0000313|Proteomes:UP000531813}, PSU-2311
RC {ECO:0000313|EMBL:EGO6681186.1}, PSU-2464
RC {ECO:0000313|EMBL:EFM1448332.1, ECO:0000313|Proteomes:UP000519182},
RC and PSU-2607 {ECO:0000313|EMBL:EFM2063502.1,
RC ECO:0000313|Proteomes:UP000540085};
RG GenomeTrakr network: Whole genome sequencing for foodborne pathogen traceback;
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
RN [38] {ECO:0000313|EMBL:TXU32127.1, ECO:0000313|Proteomes:UP000460654}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=N023.E-21 {ECO:0000313|EMBL:TXW73079.1}, and T0181B.E-10
RC {ECO:0000313|EMBL:TXU32127.1, ECO:0000313|Proteomes:UP000460654};
RA Gasparrini A.J.;
RT "Persistent metagenomic signatures of early life antibiotic treatment in
RT the infant gut microbiota and resistome.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
RN [39] {ECO:0000313|EMBL:RLY58985.1, ECO:0000313|Proteomes:UP000281340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CMJH98b {ECO:0000313|EMBL:RLY58985.1,
RC ECO:0000313|Proteomes:UP000281340};
RA Tang B., Ma Y., He X., Cao L., Xia X., Yang H.;
RT "Comparison of Escherichia coli isolates recovered from retail chicken and
RT from chicken fecal samples by antimicrobial susceptibility test and whole
RT genome sequencing.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
RN [40] {ECO:0000313|EMBL:RRL47188.1, ECO:0000313|Proteomes:UP000272662}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UMB1727 {ECO:0000313|EMBL:RRL47188.1,
RC ECO:0000313|Proteomes:UP000272662};
RA Garretto A., Miller-Ensminger T., Wolfe A.J., Putonti C.;
RT "E. coli isolates of the female bladder.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
RN [41] {ECO:0000313|EMBL:RRD72009.1, ECO:0000313|Proteomes:UP000271008}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GBGD28 {ECO:0000313|EMBL:RRD72009.1,
RC ECO:0000313|Proteomes:UP000271008};
RA Shen C., Yang Y., Tian G.;
RT "Enterobacteriaceae from Patient.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
RN [42] {ECO:0000313|EMBL:TJQ09001.1, ECO:0000313|Proteomes:UP000309937}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FWSEC0118 {ECO:0000313|EMBL:TJQ09001.1,
RC ECO:0000313|Proteomes:UP000309937};
RA Tyson S., Peterson C.-L., Olson A., Tyler S., Cabral J., Lynch T., Knox N.,
RA Van Domselaar G., Graham M.;
RT "Food and Water Safety Consortium.";
RL Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
RN [43] {ECO:0000313|Proteomes:UP000271797, ECO:0000313|Proteomes:UP000277930}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC10089 {ECO:0000313|EMBL:VTR12696.1,
RC ECO:0000313|Proteomes:UP000406392}, NCTC10974
RC {ECO:0000313|EMBL:VFT67136.1, ECO:0000313|Proteomes:UP000358010},
RC NCTC4450 {ECO:0000313|EMBL:CAD7362794.1}, NCTC9044
RC {ECO:0000313|EMBL:VED08444.1, ECO:0000313|Proteomes:UP000271797}, and
RC NCTC9702 {ECO:0000313|EMBL:VED32966.1,
RC ECO:0000313|Proteomes:UP000277930};
RG Pathogen Informatics;
RL Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
RN [44] {ECO:0000313|EMBL:MQK25121.1, ECO:0000313|Proteomes:UP000359125}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A016f {ECO:0000313|EMBL:MQK25121.1,
RC ECO:0000313|Proteomes:UP000359125};
RX PubMed=31642700; DOI=.1289/EHP5251;
RA Li J., Bi Z., Ma S., Chen B., Cai C., He J., Schwarz S., Sun C., Zhou Y.,
RA Yin J., Hulth A., Wang Y., Shen Z., Wang S., Wu C., Nilsson L.E.,
RA Walsh T.R., Borjesson S., Shen J., Sun Q., Wang Y.;
RT "Inter-host Transmission of Carbapenemase-Producing Escherichia coli among
RT Humans and Backyard Animals.";
RL Environ. Health Perspect. 127:107009-107009(2019).
RN [45] {ECO:0000313|EMBL:MQS32675.1, ECO:0000313|Proteomes:UP000460351}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RXD010 {ECO:0000313|EMBL:MQS32675.1,
RC ECO:0000313|Proteomes:UP000460351};
RX PubMed=31652858;
RA Peng Z., Li X., Hu Z., Li Z., Lv Y., Lei M., Wu B., Chen H., Wang X.;
RT "Characteristics of Carbapenem-Resistant and Colistin-Resistant Escherichia
RT coli Co-Producing NDM-1 and MCR-1 from Pig Farms in China.";
RL Microorganisms 7:0-E482(2019).
RN [46] {ECO:0000313|Proteomes:UP000438958, ECO:0000313|Proteomes:UP000475070}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BIOML-A112 {ECO:0000313|EMBL:NAG21505.1,
RC ECO:0000313|Proteomes:UP000475070}, and BIOML-A382
RC {ECO:0000313|EMBL:MSI71337.1, ECO:0000313|Proteomes:UP000438958};
RX PubMed=31477907; DOI=.1038/s41591-019-0559-3;
RA Poyet M., Groussin M., Gibbons S.M., Avila-Pacheco J., Jiang X.,
RA Kearney S.M., Perrotta A.R., Berdy B., Zhao S., Lieberman T.D.,
RA Swanson P.K., Smith M., Roesemann S., Alexander J.E., Rich S.A., Livny J.,
RA Vlamakis H., Clish C., Bullock K., Deik A., Scott J., Pierce K.A.,
RA Xavier R.J., Alm E.J.;
RT "A library of human gut bacterial isolates paired with longitudinal
RT multiomics data enables mechanistic microbiome research.";
RL Nat. Med. 25:1442-1452(2019).
RN [47] {ECO:0000313|Proteomes:UP000288730, ECO:0000313|Proteomes:UP000290652}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=29_CAASB {ECO:0000313|EMBL:RXD17074.1,
RC ECO:0000313|Proteomes:UP000288730}, and 49_rectal
RC {ECO:0000313|EMBL:RXB25092.1, ECO:0000313|Proteomes:UP000290652};
RA Potter R., Zou Z., Henderson J., Dantas G.;
RT "Genomic analysis of febrile catheter-associated UTI E. coli isolates.";
RL Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
RN [48] {ECO:0000313|EMBL:RYL77681.1, ECO:0000313|Proteomes:UP000291778}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SCPM-O-B-8431 {ECO:0000313|EMBL:RYL77681.1}, and
RC SCPM-O-B-8431(U15) {ECO:0000313|Proteomes:UP000291778};
RA Slukin P., Fursova N., Ermolenko Z., Mayskaya N., Kislichkina A.,
RA Mukhina T., Sizova A., Bogun A.;
RL Submitted (FEB-2019) to the EMBL/GenBank/DDBJ databases.
RN [49] {ECO:0000313|EMBL:KAB0122068.1, ECO:0000313|Proteomes:UP000327073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=STEC_170836 {ECO:0000313|EMBL:KAB0122068.1,
RC ECO:0000313|Proteomes:UP000327073};
RA Abdalhamid B., Mccutchen E.L., Bouska A.C., Hinrichs S.H., Iwen P.C.;
RT "Whole Genome Sequencing of Shiga-Toxin Escherichia coli Strains from
RT Nebraska.";
RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
RN [50] {ECO:0000313|EMBL:EFC2248909.1, ECO:0000313|Proteomes:UP000531916}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=19MD07CB01-EC {ECO:0000313|EMBL:EFD6886799.1,
RC ECO:0000313|Proteomes:UP000531962}, CVM N17EC0060
RC {ECO:0000313|EMBL:MGE16337.1, ECO:0000313|Proteomes:UP000272336}, CVM
RC N17EC0276 {ECO:0000313|EMBL:MIB59801.1,
RC ECO:0000313|Proteomes:UP000271175}, CVM N17EC1330
RC {ECO:0000313|EMBL:EAC1533635.1, ECO:0000313|Proteomes:UP000382540},
RC CVM N18EC122 {ECO:0000313|EMBL:EFC9751839.1,
RC ECO:0000313|Proteomes:UP000532204}, CVM N19EC0113
RC {ECO:0000313|EMBL:EFH4948448.1, ECO:0000313|Proteomes:UP000535531},
RC CVM N19EC0130 {ECO:0000313|EMBL:EFH4963026.1,
RC ECO:0000313|Proteomes:UP000543424}, CVM N19EC0189
RC {ECO:0000313|EMBL:EFH3676550.1, ECO:0000313|Proteomes:UP000534496},
RC CVM N19EC0510 {ECO:0000313|EMBL:EFH6097822.1,
RC ECO:0000313|Proteomes:UP000531463}, CVM N19EC0596
RC {ECO:0000313|EMBL:EFH6168215.1, ECO:0000313|Proteomes:UP000537181},
RC FSIS11705178 {ECO:0000313|EMBL:EFC3526409.1,
RC ECO:0000313|Proteomes:UP000538406}, FSIS11706358
RC {ECO:0000313|EMBL:EFB4533386.1, ECO:0000313|Proteomes:UP000542214},
RC FSIS11919500 {ECO:0000313|EMBL:EFC2248909.1,
RC ECO:0000313|Proteomes:UP000531916}, FSIS11921886
RC {ECO:0000313|EMBL:EFB2194691.1, ECO:0000313|Proteomes:UP000519859},
RC FSIS11923834 {ECO:0000313|EMBL:EFE8676130.1,
RC ECO:0000313|Proteomes:UP000533482}, and FSIS1702902
RC {ECO:0000313|EMBL:EFE5124380.1, ECO:0000313|Proteomes:UP000560466};
RG NARMS: The National Antimicrobial Resistance Monitoring System;
RL Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
RN [51] {ECO:0000313|EMBL:TZE41292.1, ECO:0000313|Proteomes:UP000324120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=347 {ECO:0000313|EMBL:TZE41292.1,
RC ECO:0000313|Proteomes:UP000324120};
RA Cormier A.C., Chalmer G., Cook S.R., Zaheer R., Hannon S.J., Booker C.W.,
RA Read R., Gow S.P., Mcallister T.A., Boerlin P.;
RT "The presence and diversity of blaCTX-M among Escherichia coli from urban
RT wastewater and feedlot cattle, in Alberta, Canada.";
RL Submitted (JUN-2019) to the EMBL/GenBank/DDBJ databases.
RN [52] {ECO:0000313|EMBL:MPU48192.1, ECO:0000313|Proteomes:UP000392867}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WU2356 {ECO:0000313|EMBL:MPU48192.1,
RC ECO:0000313|Proteomes:UP000392867};
RA Neumann N.;
RT "Identification of Water Treatment Resistant and Multidrug Resistant
RT Urinary Pathogenic Escherichia coli in Wastewater.";
RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
RN [53] {ECO:0000313|EMBL:TXQ30729.1, ECO:0000313|Proteomes:UP000321295}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1_45_11 {ECO:0000313|EMBL:TXQ30729.1,
RC ECO:0000313|Proteomes:UP000321295};
RA Siniagina M.N., Markelova M.I., Laikov A.V., Boulygina E.A.,
RA Khusnutdinova D.R., Kharchenko A., Grigoryeva T.V.;
RT "Whole genome analysis of cultivated E. coli strains isolated from CD
RT patients and healthy donors.";
RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
RN [54] {ECO:0000313|EMBL:QHP97902.1, ECO:0000313|Proteomes:UP000464359}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EC42405 {ECO:0000313|EMBL:QHP97902.1,
RC ECO:0000313|Proteomes:UP000464359};
RA Valat C.;
RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
RN [55] {ECO:0000313|EMBL:KAE9728182.1, ECO:0000313|Proteomes:UP000437875}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TzEc067 {ECO:0000313|EMBL:KAE9728182.1,
RC ECO:0000313|Proteomes:UP000437875};
RA Subbiah M., Call D.R.;
RT "Antimicrobial-resistant enteric bacteria are widely distributed amongst
RT people, animals and the environment in northern Tanzania.";
RL Submitted (OCT-2019) to the EMBL/GenBank/DDBJ databases.
RN [56] {ECO:0000313|EMBL:MTE91949.1, ECO:0000313|Proteomes:UP000486847}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SE161 {ECO:0000313|EMBL:MTE91949.1,
RC ECO:0000313|Proteomes:UP000486847};
RA Ghatak S., Milton A.P., Rhetso K., Purkait D., Das S., Puro K.-U.,
RA Shakuntala I., Sen A., Sanjukta R., Priya G.B., Mawlong M., Lyngdoh V.,
RA Rynghang J., Mawphlang B.L.;
RT "Comparative genomic analysis of antimicrobial resistant Escherichia coli
RT of diverse origin.";
RL Submitted (OCT-2019) to the EMBL/GenBank/DDBJ databases.
RN [57] {ECO:0000313|EMBL:HAJ5152717.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=887_Uriselect {ECO:0000313|EMBL:HAN4315874.1}, AA002
RC {ECO:0000313|EMBL:HBC2921197.1}, AMC_487
RC {ECO:0000313|EMBL:HAI5334923.1}, BCW_4213
RC {ECO:0000313|EMBL:HAI2143714.1}, C0382
RC {ECO:0000313|EMBL:HAH7771620.1}, EC00763
RC {ECO:0000313|EMBL:HAH4526594.1}, Ecoli[ST-219]
RC {ECO:0000313|EMBL:HAJ5152717.1}, Escherichia coli
RC {ECO:0000313|EMBL:HBB1575389.1}, EuSCAPE_DE065
RC {ECO:0000313|EMBL:HAJ5960438.1}, and W1_5_ERB1
RC {ECO:0000313|EMBL:HAH1421082.1};
RG NCBI Pathogen Detection Project;
RL Submitted (NOV-2019) to the EMBL/GenBank/DDBJ databases.
RN [58] {ECO:0000313|Proteomes:UP000430081, ECO:0000313|Proteomes:UP000462271}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10432wF6 {ECO:0000313|EMBL:MWL45947.1,
RC ECO:0000313|Proteomes:UP000487258}, 10432wG7
RC {ECO:0000313|EMBL:MWL06691.1, ECO:0000313|Proteomes:UP000430081}, and
RC 10432wG8 {ECO:0000313|EMBL:MWK97751.1,
RC ECO:0000313|Proteomes:UP000462271};
RA Subbiah M., Call D.;
RT "Enteriobacteria Tanzani isolates_10432.";
RL Submitted (DEC-2019) to the EMBL/GenBank/DDBJ databases.
RN [59] {ECO:0000313|EMBL:MWP26943.1, ECO:0000313|Proteomes:UP000438259}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10433wD12 {ECO:0000313|EMBL:MWP26943.1,
RC ECO:0000313|Proteomes:UP000438259};
RA Subbiah M., Call D.;
RT "Enteriobacteria Tanzani isolates_10433.";
RL Submitted (DEC-2019) to the EMBL/GenBank/DDBJ databases.
RN [60] {ECO:0000313|Proteomes:UP000435694, ECO:0000313|Proteomes:UP000436141}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10434wA8 {ECO:0000313|EMBL:MXG80633.1,
RC ECO:0000313|Proteomes:UP000470386}, 10434wB8
RC {ECO:0000313|EMBL:MXH39431.1, ECO:0000313|Proteomes:UP000435694},
RC 10434wD1 {ECO:0000313|EMBL:MXI74414.1,
RC ECO:0000313|Proteomes:UP000436141}, and 10434wG3
RC {ECO:0000313|EMBL:MXJ07804.1, ECO:0000313|Proteomes:UP000447081};
RA Subbiah M., Call D.;
RT "Enteriobacteria Tanzani isolates_10434.";
RL Submitted (DEC-2019) to the EMBL/GenBank/DDBJ databases.
RN [61] {ECO:0000313|Proteomes:UP000430387, ECO:0000313|Proteomes:UP000436482}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8378wC7 {ECO:0000313|EMBL:MWT83773.1,
RC ECO:0000313|Proteomes:UP000480485}, 8379wE2
RC {ECO:0000313|EMBL:MWR36725.1, ECO:0000313|Proteomes:UP000460875},
RC 8379wE6 {ECO:0000313|EMBL:MWR87115.1,
RC ECO:0000313|Proteomes:UP000436482}, and 8380wG1
RC {ECO:0000313|EMBL:MWR12969.1, ECO:0000313|Proteomes:UP000430387};
RA Subbiah M., Call D.;
RT "Enteriobacteria Tanzani isolates_8377-8380.";
RL Submitted (DEC-2019) to the EMBL/GenBank/DDBJ databases.
RN [62] {ECO:0000313|EMBL:NDR93555.1, ECO:0000313|Proteomes:UP000471490}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 11230 {ECO:0000313|EMBL:NDR93555.1,
RC ECO:0000313|Proteomes:UP000471490};
RX PubMed=32021174;
RA Kedziora A., Wernecki M., Korzekwa K., Speruda M., Gerasymchuk Y.,
RA Lukowiak A., Bugla-Ploskonska G.;
RT "Consequences Of Long-Term Bacteria's Exposure To Silver Nanoformulations
RT With Different PhysicoChemical Properties.";
RL Int J Nanomedicine 15:199-213(2020).
RN [63] {ECO:0000313|EMBL:QLG55814.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=EC2 {ECO:0000313|EMBL:QLG55814.1};
RX PubMed=32739475;
RA Mowlaboccus S., Daley D., Pang S., Gottlieb T., Merlino J., Nimmo G.R.,
RA George N., Korman T.M., Streitberg R., Robson J., Peachey G., Collignon P.,
RA Bradbury S., Colombi E., Ramsay J.P., Rogers B.A., Coombs G.W.;
RT "Identification and characterisation of fosfomycin resistance in
RT Escherichia coli urinary tract infection isolates from Australia.";
RL Int. J. Antimicrob. Agents 56:0-106121(2020).
RN [64] {ECO:0000313|EMBL:NYP87589.1, ECO:0000313|Proteomes:UP000517067}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EH3306 {ECO:0000313|EMBL:NYQ41111.1}, and EH3307
RC {ECO:0000313|EMBL:NYP87589.1, ECO:0000313|Proteomes:UP000517067};
RX PubMed=32599678;
RA Habets A., Crombe F., Nakamura K., Guerin V., De Rauw K., Pierard D.,
RA Saulmont M., Hayashi T., Mainil J.G., Thiry D.;
RT "Genetic characterization of Shigatoxigenic and enteropathogenic
RT Escherichia coli O80:H2 from diarrheic and septicemic calves and
RT relatedness to human Shigatoxigenic E. coli O80:H2.";
RL J. Appl. Microbiol. 0:0-0(2020).
RN [65] {ECO:0000313|EMBL:NGE91297.1, ECO:0000313|Proteomes:UP000472856}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ECM_75 {ECO:0000313|EMBL:NGE91297.1,
RC ECO:0000313|Proteomes:UP000472856};
RA Tokajian S., El Chaar M., El Khoury M.;
RT "WGS of Carbapenem-Resistant Enterobacteriaceae.";
RL Submitted (FEB-2020) to the EMBL/GenBank/DDBJ databases.
RN [66] {ECO:0000313|Proteomes:UP000521991, ECO:0000313|Proteomes:UP000521994}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=2014C-3796 {ECO:0000313|EMBL:EFI0211997.1,
RC ECO:0000313|Proteomes:UP000521994}, 2017EL-1017b
RC {ECO:0000313|EMBL:EFC8019268.1, ECO:0000313|Proteomes:UP000518092},
RC PNUSAE002719 {ECO:0000313|EMBL:EFM8156805.1,
RC ECO:0000313|Proteomes:UP000555763}, PNUSAE004166
RC {ECO:0000313|EMBL:EFH0367134.1, ECO:0000313|Proteomes:UP000521991},
RC PNUSAE005278 {ECO:0000313|EMBL:EFF8956338.1,
RC ECO:0000313|Proteomes:UP000524010}, and PNUSAE011918
RC {ECO:0000313|EMBL:EFA8786676.1, ECO:0000313|Proteomes:UP000567387};
RG PulseNet: The National Subtyping Network for Foodborne Disease Surveillance;
RA Tarr C.L., Trees E., Katz L.S., Carleton-Romer H.A., Stroika S.,
RA Kucerova Z., Roache K.F., Sabol A.L., Besser J., Gerner-Smidt P.;
RL Submitted (FEB-2020) to the EMBL/GenBank/DDBJ databases.
RN [67] {ECO:0000313|Proteomes:UP000469708, ECO:0000313|Proteomes:UP000471360}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8375wB1 {ECO:0000313|EMBL:NEN72542.1,
RC ECO:0000313|Proteomes:UP000471360}, and 8375wC2
RC {ECO:0000313|EMBL:NEM87704.1, ECO:0000313|Proteomes:UP000469708};
RA Subbiah M., Call D.;
RL Submitted (FEB-2020) to the EMBL/GenBank/DDBJ databases.
RN [68] {ECO:0000313|EMBL:QLA44640.1, ECO:0000313|Proteomes:UP000509457}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ARL09/232 {ECO:0000313|EMBL:QLA44640.1,
RC ECO:0000313|Proteomes:UP000509457};
RA Olivera C.D., Rakonjac J.;
RT "Complete genome assembly of New Delhi metallo-beta-lactamase-1 (NDM-
RT 1)- producing Escherichia coli human isolate from New Zealand.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [69] {ECO:0000313|EMBL:MBE9994092.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=6D1-6 {ECO:0000313|EMBL:MBE9994092.1};
RA Fatoba D., Amoako D.G., Abia Akebe L.K., Essack S.;
RT "Genomic Epidemiology of Antibiotic-Resistant Bacteria from Agricultural
RT Soil Fertilized with Poultry Manure in KwaZulu Natal, South Africa.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
RN [70] {ECO:0000313|EMBL:MBA1886528.1, ECO:0000313|Proteomes:UP000523197}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CE1966 {ECO:0000313|EMBL:MBA1886528.1,
RC ECO:0000313|Proteomes:UP000523197};
RA Nesporova K., Wyrsch E.R., Valcek A., Bitar I., Chaw K., Harris P.,
RA Hrabak J., Djordjevic S.P., Dolejska M.;
RT "Epidemiological investigations into extended-spectrum beta-lactam
RT resistant Escherichia coli ST457 carried by Australian Silver gulls
RT identified clonal lineages that cause ExPEC disease.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
RN [71] {ECO:0000313|Proteomes:UP000509796}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EC2 {ECO:0000313|Proteomes:UP000509796};
RA Mowlaboccus S., Daley D., Pang S., Gottlieb T., Nimmo G.R., George N.,
RA Korman T.M., Strietberg R., Robson J., Peachey G., Collignon P.,
RA Bradbury S., Colombi E., Ramsay J.P., Rogers B.A., Coombs G.W.;
RT "Identification and Characterisation of Fosfomycin Resistance in
RT Escherichia coli Urinary Tract Infection Isolates from Australia.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
RN [72] {ECO:0000313|Proteomes:UP000512171, ECO:0000313|Proteomes:UP000512182}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RHB01-C20 {ECO:0000313|EMBL:QMS38185.1,
RC ECO:0000313|Proteomes:UP000514533}, RHB07-C04
RC {ECO:0000313|EMBL:QMP46557.1, ECO:0000313|Proteomes:UP000514715},
RC RHB10-C12 {ECO:0000313|EMBL:QMO42219.1,
RC ECO:0000313|Proteomes:UP000514754}, RHB30-C10
RC {ECO:0000313|EMBL:QMF65947.1, ECO:0000313|Proteomes:UP000512322},
RC RHB34-C21 {ECO:0000313|Proteomes:UP000512171}, RHBSTW-00177
RC {ECO:0000313|EMBL:QLY95546.1, ECO:0000313|Proteomes:UP000512182},
RC RHBSTW-00300 {ECO:0000313|EMBL:QLX46490.1,
RC ECO:0000313|Proteomes:UP000512230}, and RHBSTW-00474
RC {ECO:0000313|EMBL:MBA7719844.1};
RA Shaw L.P.;
RT "REHAB project genomes.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
RN [73] {ECO:0000313|EMBL:BCG35280.1, ECO:0000313|Proteomes:UP000509260}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TUM18780 {ECO:0000313|EMBL:BCG35280.1,
RC ECO:0000313|Proteomes:UP000509260};
RA Ito Y., Aoki K., Nakayama N., Ohtsuka M., Ota M., Kaneko N., Yoshida M.,
RA Ishii Y., Tateda K., Matsuse H.;
RT "Whole-genome sequencing of blaNDM-5 positive Escherichia coli isolated
RT from a Japanese patient with no history of travel abroad.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
RN [74] {ECO:0000313|EMBL:MDM1662703.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=70 {ECO:0000313|EMBL:MDM1662703.1};
RA Dong N.;
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
RN [75] {ECO:0000313|EMBL:MBA6239171.1, ECO:0000313|Proteomes:UP000581425}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1409 {ECO:0000313|EMBL:MBA6239171.1,
RC ECO:0000313|Proteomes:UP000581425};
RA Ekesi N.S., Alrubaye A., Rhoads D.;
RT "Analysis of Genomes of Bacterial Isolates from Lameness Outbreaks in
RT Broilers.";
RL Submitted (JUL-2020) to the EMBL/GenBank/DDBJ databases.
RN [76] {ECO:0000313|EMBL:NZD15695.1, ECO:0000313|Proteomes:UP000543240}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PE01_346 {ECO:0000313|EMBL:NZD15695.1,
RC ECO:0000313|Proteomes:UP000543240};
RA Salvatierra G., Davila-Barclay A., Tsukayama P.;
RT "Market chickens as a source of antibiotic-resistant Escherichia coli in a
RT Peruvian shanty town.";
RL Submitted (JUL-2020) to the EMBL/GenBank/DDBJ databases.
RN [77] {ECO:0000313|EMBL:MBB2468096.1, ECO:0000313|Proteomes:UP000531761}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=10.0349 {ECO:0000313|EMBL:MBB2468096.1,
RC ECO:0000313|Proteomes:UP000531761};
RA Lacher D.W., Mammel M.K., Gangiredla J., Gebru S.T., Barnaba T.J.,
RA Majowicz S.A., Dudley E.G.;
RT "Draft genome sequences of isolates of diverse host origin from the E. coli
RT Reference Center.";
RL Submitted (AUG-2020) to the EMBL/GenBank/DDBJ databases.
RN [78] {ECO:0000313|EMBL:EGO5106978.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=PNUSAE056915 {ECO:0000313|EMBL:EGO5106978.1};
RG PulseNet: The National Subtyping Network for Foodborne Disease Surveillance;
RL Submitted (AUG-2020) to the EMBL/GenBank/DDBJ databases.
RN [79] {ECO:0000313|EMBL:QOY30534.1, ECO:0000313|Proteomes:UP000581425}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1409 {ECO:0000313|EMBL:QOY30534.1,
RC ECO:0000313|Proteomes:UP000581425};
RA Rhoads D., Ekesi N.S.;
RT "Analysis of Genomes of Bacterial Isolates from Lameness Outbreaks in
RT Broilers.";
RL Submitted (OCT-2020) to the EMBL/GenBank/DDBJ databases.
RN [80] {ECO:0000313|EMBL:MBF9178022.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=E3 {ECO:0000313|EMBL:MBF9178022.1};
RA Hetsa B., Amoako D.G., Akebe A.L., Asante J., Essack S.Y.;
RT "Genomic surveiliance of eskapee pathogens from blood stream infections in
RT kzn.";
RL Submitted (NOV-2020) to the EMBL/GenBank/DDBJ databases.
RN [81] {ECO:0000313|Proteomes:UP000594840, ECO:0000313|Proteomes:UP000594864}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FDAARGOS_943 {ECO:0000313|EMBL:QPR13766.1,
RC ECO:0000313|Proteomes:UP000594840}, and FDAARGOS_945
RC {ECO:0000313|EMBL:QPR07003.1, ECO:0000313|Proteomes:UP000594864};
RA Sproer C., Gronow S., Severitt S., Schroder I., Tallon L., Sadzewicz L.,
RA Zhao X., Boylan J., Ott S., Bowen H., Vavikolanu K., Mehta A.,
RA Aluvathingal J., Nadendla S., Lowell S., Myers T., Yan Y., Sichtig H.;
RT "FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS):
RT Supporting development and validation of Infectious Disease Dx tests.";
RL Submitted (DEC-2020) to the EMBL/GenBank/DDBJ databases.
RN [82] {ECO:0000313|EMBL:QLN20796.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=RHB34-C21 {ECO:0000313|EMBL:QLN20796.1};
RX PubMed=34609275;
RA AbuOun M., Jones H., Stubberfield E., Gilson D., Shaw L.P., Hubbard A.T.M.,
RA Chau K.K., Sebra R., Peto T.E.A., Crook D.W., Read D.S., Gweon H.S.,
RA Walker A.S., Stoesser N., Smith R.P., Anjum M.F.,
RA On Behalf Of The Rehab Consortium.;
RT "A genomic epidemiological study shows that prevalence of antimicrobial
RT resistance in Enterobacterales is associated with the livestock host, as
RT well as antimicrobial usage.";
RL Microb. Genom. 0:0-0(2021).
RN [83] {ECO:0000313|EMBL:QRZ97036.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CFSAN083829 {ECO:0000313|EMBL:QRZ97036.1};
RA Hoffmann M., Balkey M., Ronco T., Hendriksen R.S.;
RT "Co-localization of colistin and carbapenem -resistance genes on a novel
RT transferable IncHI2 plasmid in Escherichia coli from chicken-origin.";
RL Submitted (FEB-2021) to the EMBL/GenBank/DDBJ databases.
RN [84] {ECO:0000313|EMBL:MDM1662703.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=70 {ECO:0000313|EMBL:MDM1662703.1};
RX PubMed=34801490;
RA Dong N., Zeng Y., Cai C., Sun C., Lu J., Liu C., Zhou H., Sun Q., Shu L.,
RA Wang H., Wang Y., Wang S., Wu C., Chan E.W., Chen G., Shen Z., Chen S.,
RA Zhang R.;
RT "Prevalence, transmission, and molecular epidemiology of tet(X)-positive
RT bacteria among humans, animals, and environmental niches in China: An
RT epidemiological, and genomic-based study.";
RL Sci. Total Environ. 818:0-0(2022).
RN [85] {ECO:0000313|EMBL:MDI0698662.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=AD_537 {ECO:0000313|EMBL:MDI0698662.1};
RA Fang Y., Zhang P., Stanford K., Yang X.;
RT "Phenotype-genotype associations and population structure of Escherichia
RT coli recovered from cattle.";
RL Submitted (JUN-2022) to the EMBL/GenBank/DDBJ databases.
RN [86] {ECO:0000313|EMBL:MCZ5094416.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=EC_E2BE_2_E_CuN_CeN {ECO:0000313|EMBL:MCZ5094416.1};
RA Sanderson H., Nnajibe C., Mccarthy M., Rubin J., Dillon J., White A.P.;
RT "Genome Hybrid Assemblies of 274 Avian and Broiler Barn Environment
RT Associated Escherichia coli Isolated from Saskatchewan Broiler Farms.";
RL Submitted (DEC-2022) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000256|HAMAP-Rule:MF_00059}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550,
CC ECO:0000256|HAMAP-Rule:MF_00059};
CC -!- SUBUNIT: Homodimer. The RNAP catalytic core consists of 2 alpha, 1
CC beta, 1 beta' and 1 omega subunit. When a sigma factor is associated
CC with the core the holoenzyme is formed, which can initiate
CC transcription. {ECO:0000256|HAMAP-Rule:MF_00059}.
CC -!- DOMAIN: The N-terminal domain is essential for RNAP assembly and basal
CC transcription, whereas the C-terminal domain is involved in interaction
CC with transcriptional regulators and with upstream promoter elements.
CC {ECO:0000256|HAMAP-Rule:MF_00059}.
CC -!- SIMILARITY: Belongs to the RNA polymerase alpha chain family.
CC {ECO:0000256|ARBA:ARBA00007123, ECO:0000256|HAMAP-Rule:MF_00059}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; EU894395; ACI76956.1; -; Genomic_DNA.
DR EMBL; EU894396; ACI76957.1; -; Genomic_DNA.
DR EMBL; CP015229; ANO91215.1; -; Genomic_DNA.
DR EMBL; CP010122; APJ78686.1; -; Genomic_DNA.
DR EMBL; CP017631; APT00926.1; -; Genomic_DNA.
DR EMBL; CP021175; ARR33374.1; -; Genomic_DNA.
DR EMBL; CP021339; ART26427.1; -; Genomic_DNA.
DR EMBL; CP024978; ATZ33113.1; -; Genomic_DNA.
DR EMBL; CP024147; AUJ97727.1; -; Genomic_DNA.
DR EMBL; CP024141; AUJ99383.1; -; Genomic_DNA.
DR EMBL; CP026399; AUY03822.1; -; Genomic_DNA.
DR EMBL; CP020520; AVU64171.1; -; Genomic_DNA.
DR EMBL; CP029741; AWS63044.1; -; Genomic_DNA.
DR EMBL; CP031546; AXO09198.1; -; Genomic_DNA.
DR EMBL; CP025573; AZZ28381.1; -; Genomic_DNA.
DR EMBL; AP023197; BCG35280.1; -; Genomic_DNA.
DR EMBL; CABEFB020000003; CAD7362794.1; -; Genomic_DNA.
DR EMBL; AAAGZE010000044; EAC1533635.1; -; Genomic_DNA.
DR EMBL; AASATZ010000052; EFA4420706.1; -; Genomic_DNA.
DR EMBL; AASCBU010000033; EFA8786676.1; -; Genomic_DNA.
DR EMBL; AASCIU010000049; EFA9670801.1; -; Genomic_DNA.
DR EMBL; AASCJS010000051; EFA9848422.1; -; Genomic_DNA.
DR EMBL; AASDBN010000041; EFB1699335.1; -; Genomic_DNA.
DR EMBL; AASDFP010000061; EFB2194691.1; -; Genomic_DNA.
DR EMBL; AASFMQ010000059; EFB3618189.1; -; Genomic_DNA.
DR EMBL; AASFZR010000037; EFB4533386.1; -; Genomic_DNA.
DR EMBL; AASEPP010000062; EFC2248909.1; -; Genomic_DNA.
DR EMBL; AASHPR010000038; EFC3526409.1; -; Genomic_DNA.
DR EMBL; AASHWA010000042; EFC5414191.1; -; Genomic_DNA.
DR EMBL; AASIMK010000006; EFC8019268.1; -; Genomic_DNA.
DR EMBL; AASEBA010000056; EFC9751839.1; -; Genomic_DNA.
DR EMBL; AASDTK010000055; EFD1613948.1; -; Genomic_DNA.
DR EMBL; AASKVF010000039; EFD6886799.1; -; Genomic_DNA.
DR EMBL; AASNFJ010000035; EFE5124380.1; -; Genomic_DNA.
DR EMBL; AASOHJ010000052; EFE8676130.1; -; Genomic_DNA.
DR EMBL; AASRHK010000066; EFF8956338.1; -; Genomic_DNA.
DR EMBL; AASURL010000065; EFH0367134.1; -; Genomic_DNA.
DR EMBL; AASVOK010000072; EFH3411102.1; -; Genomic_DNA.
DR EMBL; AASVPF010000076; EFH3510169.1; -; Genomic_DNA.
DR EMBL; AASVQO010000038; EFH3676550.1; -; Genomic_DNA.
DR EMBL; AASWBA010000067; EFH4948448.1; -; Genomic_DNA.
DR EMBL; AASWBF010000046; EFH4963026.1; -; Genomic_DNA.
DR EMBL; AASWIS010000035; EFH5894993.1; -; Genomic_DNA.
DR EMBL; AASWKH010000040; EFH6097822.1; -; Genomic_DNA.
DR EMBL; AASWKX010000051; EFH6168215.1; -; Genomic_DNA.
DR EMBL; AASWOY010000042; EFH6650350.1; -; Genomic_DNA.
DR EMBL; AASXRC010000005; EFI0211997.1; -; Genomic_DNA.
DR EMBL; AASYAS010000043; EFI1484448.1; -; Genomic_DNA.
DR EMBL; AASZRA010000030; EFI6954578.1; -; Genomic_DNA.
DR EMBL; AATETU010000050; EFK3895296.1; -; Genomic_DNA.
DR EMBL; AATJKW010000044; EFL9839305.1; -; Genomic_DNA.
DR EMBL; AATJQG010000046; EFM0518758.1; -; Genomic_DNA.
DR EMBL; AATJYL010000069; EFM1448332.1; -; Genomic_DNA.
DR EMBL; AATKDF010000041; EFM2063502.1; -; Genomic_DNA.
DR EMBL; AATLXB010000066; EFM7862770.1; -; Genomic_DNA.
DR EMBL; AATLZG010000040; EFM8156805.1; -; Genomic_DNA.
DR EMBL; AAVQAW010000039; EGD0651211.1; -; Genomic_DNA.
DR EMBL; AAXDAP010000020; EGO5106978.1; -; Genomic_DNA.
DR EMBL; AAXDPX010000038; EGO6681186.1; -; Genomic_DNA.
DR EMBL; AAXELD010000048; EGO8705106.1; -; Genomic_DNA.
DR EMBL; AAXHKF010000038; EGP6255371.1; -; Genomic_DNA.
DR EMBL; ABBDFQ010000035; EHS3288172.1; -; Genomic_DNA.
DR EMBL; ABBDHW010000031; EHS3598252.1; -; Genomic_DNA.
DR EMBL; ABBDJP010000032; EHS3810497.1; -; Genomic_DNA.
DR EMBL; ABBDLD010000031; EHS3999423.1; -; Genomic_DNA.
DR EMBL; ABBDMN010000031; EHS4135850.1; -; Genomic_DNA.
DR EMBL; ABBDMM010000032; EHS4170237.1; -; Genomic_DNA.
DR EMBL; ABBDMP010000031; EHS4175389.1; -; Genomic_DNA.
DR EMBL; ABBDMO010000035; EHS4180557.1; -; Genomic_DNA.
DR EMBL; ABBDNM010000034; EHS4295903.1; -; Genomic_DNA.
DR EMBL; ABBDNR010000030; EHS4315782.1; -; Genomic_DNA.
DR EMBL; BFIH01000056; GCO38575.1; -; Genomic_DNA.
DR EMBL; BFXY01000086; GDH47838.1; -; Genomic_DNA.
DR EMBL; BGIE01000036; GDV26614.1; -; Genomic_DNA.
DR EMBL; DABALL010000044; HAH1421082.1; -; Genomic_DNA.
DR EMBL; DABBJX010000035; HAH4526594.1; -; Genomic_DNA.
DR EMBL; DABCJL010000021; HAH7771620.1; -; Genomic_DNA.
DR EMBL; DABDSA010000034; HAI2143714.1; -; Genomic_DNA.
DR EMBL; DABERK010000044; HAI5334923.1; -; Genomic_DNA.
DR EMBL; DABGKZ010000050; HAJ5152717.1; -; Genomic_DNA.
DR EMBL; DABHXT010000038; HAJ5960438.1; -; Genomic_DNA.
DR EMBL; DABUHN010000025; HAN4315874.1; -; Genomic_DNA.
DR EMBL; DADUEU010000037; HBB1575389.1; -; Genomic_DNA.
DR EMBL; DADXYW010000057; HBC2921197.1; -; Genomic_DNA.
DR EMBL; VZEL01000032; KAB0122068.1; -; Genomic_DNA.
DR EMBL; WSGM01000022; KAE9728182.1; -; Genomic_DNA.
DR EMBL; LGZN01000056; KNF65551.1; -; Genomic_DNA.
DR EMBL; LDYI01000143; KPO07031.1; -; Genomic_DNA.
DR EMBL; JABFNF010000006; MBA1886528.1; -; Genomic_DNA.
DR EMBL; JACGTG010000001; MBA6239171.1; -; Genomic_DNA.
DR EMBL; JABXPW010000003; MBA7719844.1; -; Genomic_DNA.
DR EMBL; JABWMK020000036; MBB2468096.1; -; Genomic_DNA.
DR EMBL; JAAMTB010000031; MBE9994092.1; -; Genomic_DNA.
DR EMBL; JADQTC010000333; MBF9178022.1; -; Genomic_DNA.
DR EMBL; JAPXEC010000003; MCZ5094416.1; -; Genomic_DNA.
DR EMBL; JAMRHT010000033; MDI0698662.1; -; Genomic_DNA.
DR EMBL; JACAMR010000058; MDM1662703.1; -; Genomic_DNA.
DR EMBL; RNLZ01000059; MGE16337.1; -; Genomic_DNA.
DR EMBL; ROAL01000004; MIB59801.1; -; Genomic_DNA.
DR EMBL; RTJF01000050; MJL96035.1; -; Genomic_DNA.
DR EMBL; VOTT01000036; MPU48192.1; -; Genomic_DNA.
DR EMBL; RYCF01000034; MQK25121.1; -; Genomic_DNA.
DR EMBL; SQQU01000038; MQS32675.1; -; Genomic_DNA.
DR EMBL; WKUE01000047; MSI71337.1; -; Genomic_DNA.
DR EMBL; WCEW01000049; MTE91949.1; -; Genomic_DNA.
DR EMBL; WTML01000031; MWK97751.1; -; Genomic_DNA.
DR EMBL; WTMQ01000020; MWL06691.1; -; Genomic_DNA.
DR EMBL; WTMY01000075; MWL45947.1; -; Genomic_DNA.
DR EMBL; WTOC01000015; MWP26943.1; -; Genomic_DNA.
DR EMBL; WTQJ01000029; MWR12969.1; -; Genomic_DNA.
DR EMBL; WTQT01000007; MWR36725.1; -; Genomic_DNA.
DR EMBL; WTQQ01000009; MWR87115.1; -; Genomic_DNA.
DR EMBL; WTRN01000004; MWT83773.1; -; Genomic_DNA.
DR EMBL; WUHB01000002; MXG80633.1; -; Genomic_DNA.
DR EMBL; WUHA01000031; MXH39431.1; -; Genomic_DNA.
DR EMBL; WUIY01000031; MXI74414.1; -; Genomic_DNA.
DR EMBL; WUIG01000034; MXJ07804.1; -; Genomic_DNA.
DR EMBL; WXKQ01000020; NAG21505.1; -; Genomic_DNA.
DR EMBL; VLTB01000326; NDR93555.1; -; Genomic_DNA.
DR EMBL; JAAGYI010000041; NEM87704.1; -; Genomic_DNA.
DR EMBL; JAAGYP010000036; NEN72542.1; -; Genomic_DNA.
DR EMBL; JAAJRI010000037; NGE91297.1; -; Genomic_DNA.
DR EMBL; JABUPU010000037; NYP87589.1; -; Genomic_DNA.
DR EMBL; JABUPJ010000036; NYQ41111.1; -; Genomic_DNA.
DR EMBL; JACCPE010000032; NZD15695.1; -; Genomic_DNA.
DR EMBL; MKQI01000135; OIZ69992.1; -; Genomic_DNA.
DR EMBL; MOGU01000035; OJM89765.1; -; Genomic_DNA.
DR EMBL; MOKI01000059; OJR50670.1; -; Genomic_DNA.
DR EMBL; LGMY01000269; OKU14758.1; -; Genomic_DNA.
DR EMBL; LRKC01000119; OKV11608.1; -; Genomic_DNA.
DR EMBL; MTPS01000077; ONG35951.1; -; Genomic_DNA.
DR EMBL; NEOL01000058; OTE55957.1; -; Genomic_DNA.
DR EMBL; NNAF01000064; OZO76974.1; -; Genomic_DNA.
DR EMBL; NNAL01000066; OZP06403.1; -; Genomic_DNA.
DR EMBL; MRVZ01000029; PAU23740.1; -; Genomic_DNA.
DR EMBL; NWRY01000050; PDV42417.1; -; Genomic_DNA.
DR EMBL; QEMT01000061; PWH57039.1; -; Genomic_DNA.
DR EMBL; QKWZ01000074; PZT67557.1; -; Genomic_DNA.
DR EMBL; QFSS01000087; PZZ67135.1; -; Genomic_DNA.
DR EMBL; CP028607; QCL46227.1; -; Genomic_DNA.
DR EMBL; CP043414; QHP97902.1; -; Genomic_DNA.
DR EMBL; CP049967; QLA44640.1; -; Genomic_DNA.
DR EMBL; CP058571; QLG55814.1; -; Genomic_DNA.
DR EMBL; CP055649; QLN20796.1; -; Genomic_DNA.
DR EMBL; CP056642; QLX46490.1; -; Genomic_DNA.
DR EMBL; CP056794; QLY95546.1; -; Genomic_DNA.
DR EMBL; CP057293; QMF65947.1; -; Genomic_DNA.
DR EMBL; CP057906; QMO42219.1; -; Genomic_DNA.
DR EMBL; CP057975; QMP46557.1; -; Genomic_DNA.
DR EMBL; CP055981; QMS38185.1; -; Genomic_DNA.
DR EMBL; CP063369; QOY30534.1; -; Genomic_DNA.
DR EMBL; CP065611; QPR07003.1; -; Genomic_DNA.
DR EMBL; CP065615; QPR13766.1; -; Genomic_DNA.
DR EMBL; CP070393; QRZ97036.1; -; Genomic_DNA.
DR EMBL; QOGZ01000031; RDA34773.1; -; Genomic_DNA.
DR EMBL; QWNV01002221; RIC82427.1; -; Genomic_DNA.
DR EMBL; RDDM01000038; RLY58985.1; -; Genomic_DNA.
DR EMBL; RQTU01000042; RRD72009.1; -; Genomic_DNA.
DR EMBL; RRVG01000012; RRL47188.1; -; Genomic_DNA.
DR EMBL; NPIM01000123; RVE13583.1; -; Genomic_DNA.
DR EMBL; SCIU01000054; RXB25092.1; -; Genomic_DNA.
DR EMBL; SCJN01000037; RXD17074.1; -; Genomic_DNA.
DR EMBL; SERV01000025; RYL77681.1; -; Genomic_DNA.
DR EMBL; UARS01000006; SPW45514.1; -; Genomic_DNA.
DR EMBL; UARW01000010; SQD01109.1; -; Genomic_DNA.
DR EMBL; UCZA01000010; SQP81730.1; -; Genomic_DNA.
DR EMBL; UFXW01000004; STC77973.1; -; Genomic_DNA.
DR EMBL; UFYN01000002; STD42296.1; -; Genomic_DNA.
DR EMBL; UFZA01000001; STE04435.1; -; Genomic_DNA.
DR EMBL; UFZD01000005; STE12501.1; -; Genomic_DNA.
DR EMBL; UFZQ01000001; STE83065.1; -; Genomic_DNA.
DR EMBL; UGAB01000002; STF41884.1; -; Genomic_DNA.
DR EMBL; UGAK01000003; STF91906.1; -; Genomic_DNA.
DR EMBL; UGBT01000002; STH70321.1; -; Genomic_DNA.
DR EMBL; UGBW01000003; STH80639.1; -; Genomic_DNA.
DR EMBL; UGCD01000002; STI15458.1; -; Genomic_DNA.
DR EMBL; UGCP01000002; STI81557.1; -; Genomic_DNA.
DR EMBL; UGCU01000001; STJ09010.1; -; Genomic_DNA.
DR EMBL; UGCV01000008; STJ15573.1; -; Genomic_DNA.
DR EMBL; UGDC01000003; STJ78241.1; -; Genomic_DNA.
DR EMBL; UGEB01000001; STL04049.1; -; Genomic_DNA.
DR EMBL; UGET01000004; STL84447.1; -; Genomic_DNA.
DR EMBL; UGFA01000002; STM05237.1; -; Genomic_DNA.
DR EMBL; UGFE01000002; STM21656.1; -; Genomic_DNA.
DR EMBL; UGFG01000001; STM36649.1; -; Genomic_DNA.
DR EMBL; UGFO01000006; STN12779.1; -; Genomic_DNA.
DR EMBL; UGGJ01000004; STN85655.1; -; Genomic_DNA.
DR EMBL; UGFM01000001; STP40896.1; -; Genomic_DNA.
DR EMBL; RRGJ01000050; TJQ09001.1; -; Genomic_DNA.
DR EMBL; VRXD01000040; TXQ30729.1; -; Genomic_DNA.
DR EMBL; QYOH01000028; TXU32127.1; -; Genomic_DNA.
DR EMBL; QYMS01000060; TXW73079.1; -; Genomic_DNA.
DR EMBL; VHKY01000042; TZE41292.1; -; Genomic_DNA.
DR EMBL; LR134238; VED08444.1; -; Genomic_DNA.
DR EMBL; LR134246; VED32966.1; -; Genomic_DNA.
DR EMBL; CAADJZ010000001; VFT67136.1; -; Genomic_DNA.
DR EMBL; CABEEY010000003; VTR12696.1; -; Genomic_DNA.
DR RefSeq; WP_001162094.1; NZ_WXZA01000038.1.
DR STRING; 585034.ECIAI1_3445; -.
DR GeneID; 84234862; -.
DR PATRIC; fig|562.10471.peg.3674; -.
DR eggNOG; COG0202; Bacteria.
DR OMA; PIKNVKY; -.
DR Proteomes; UP000037564; Unassembled WGS sequence.
DR Proteomes; UP000050556; Unassembled WGS sequence.
DR Proteomes; UP000092566; Chromosome.
DR Proteomes; UP000183429; Unassembled WGS sequence.
DR Proteomes; UP000184277; Unassembled WGS sequence.
DR Proteomes; UP000184369; Unassembled WGS sequence.
DR Proteomes; UP000184379; Chromosome.
DR Proteomes; UP000185422; Chromosome.
DR Proteomes; UP000185794; Unassembled WGS sequence.
DR Proteomes; UP000186275; Unassembled WGS sequence.
DR Proteomes; UP000188967; Unassembled WGS sequence.
DR Proteomes; UP000194199; Chromosome.
DR Proteomes; UP000194376; Unassembled WGS sequence.
DR Proteomes; UP000218543; Unassembled WGS sequence.
DR Proteomes; UP000220499; Unassembled WGS sequence.
DR Proteomes; UP000234238; Chromosome.
DR Proteomes; UP000234543; Chromosome.
DR Proteomes; UP000236551; Chromosome.
DR Proteomes; UP000239554; Chromosome.
DR Proteomes; UP000245761; Unassembled WGS sequence.
DR Proteomes; UP000247477; Chromosome.
DR Proteomes; UP000248865; Unassembled WGS sequence.
DR Proteomes; UP000249482; Unassembled WGS sequence.
DR Proteomes; UP000250208; Chromosome.
DR Proteomes; UP000250561; Unassembled WGS sequence.
DR Proteomes; UP000250671; Unassembled WGS sequence.
DR Proteomes; UP000250991; Unassembled WGS sequence.
DR Proteomes; UP000253687; Unassembled WGS sequence.
DR Proteomes; UP000254043; Unassembled WGS sequence.
DR Proteomes; UP000254079; Unassembled WGS sequence.
DR Proteomes; UP000254159; Unassembled WGS sequence.
DR Proteomes; UP000254219; Unassembled WGS sequence.
DR Proteomes; UP000254255; Unassembled WGS sequence.
DR Proteomes; UP000254428; Unassembled WGS sequence.
DR Proteomes; UP000254429; Unassembled WGS sequence.
DR Proteomes; UP000254460; Unassembled WGS sequence.
DR Proteomes; UP000254495; Unassembled WGS sequence.
DR Proteomes; UP000254647; Unassembled WGS sequence.
DR Proteomes; UP000254716; Unassembled WGS sequence.
DR Proteomes; UP000254718; Unassembled WGS sequence.
DR Proteomes; UP000254785; Unassembled WGS sequence.
DR Proteomes; UP000254877; Unassembled WGS sequence.
DR Proteomes; UP000255057; Unassembled WGS sequence.
DR Proteomes; UP000255093; Unassembled WGS sequence.
DR Proteomes; UP000255118; Unassembled WGS sequence.
DR Proteomes; UP000255164; Unassembled WGS sequence.
DR Proteomes; UP000255259; Unassembled WGS sequence.
DR Proteomes; UP000255454; Unassembled WGS sequence.
DR Proteomes; UP000255460; Unassembled WGS sequence.
DR Proteomes; UP000255543; Unassembled WGS sequence.
DR Proteomes; UP000256244; Chromosome.
DR Proteomes; UP000264871; Unassembled WGS sequence.
DR Proteomes; UP000264872; Unassembled WGS sequence.
DR Proteomes; UP000271008; Unassembled WGS sequence.
DR Proteomes; UP000271175; Unassembled WGS sequence.
DR Proteomes; UP000271797; Chromosome 1.
DR Proteomes; UP000272336; Unassembled WGS sequence.
DR Proteomes; UP000272662; Unassembled WGS sequence.
DR Proteomes; UP000277930; Chromosome 1.
DR Proteomes; UP000281340; Unassembled WGS sequence.
DR Proteomes; UP000283846; Unassembled WGS sequence.
DR Proteomes; UP000284592; Chromosome.
DR Proteomes; UP000288459; Unassembled WGS sequence.
DR Proteomes; UP000288730; Unassembled WGS sequence.
DR Proteomes; UP000290652; Unassembled WGS sequence.
DR Proteomes; UP000291778; Unassembled WGS sequence.
DR Proteomes; UP000298553; Chromosome.
DR Proteomes; UP000300554; Unassembled WGS sequence.
DR Proteomes; UP000300926; Unassembled WGS sequence.
DR Proteomes; UP000303027; Unassembled WGS sequence.
DR Proteomes; UP000309937; Unassembled WGS sequence.
DR Proteomes; UP000321295; Unassembled WGS sequence.
DR Proteomes; UP000324120; Unassembled WGS sequence.
DR Proteomes; UP000325046; Chromosome.
DR Proteomes; UP000327073; Unassembled WGS sequence.
DR Proteomes; UP000358010; Unassembled WGS sequence.
DR Proteomes; UP000359125; Unassembled WGS sequence.
DR Proteomes; UP000382540; Unassembled WGS sequence.
DR Proteomes; UP000386386; Unassembled WGS sequence.
DR Proteomes; UP000392867; Unassembled WGS sequence.
DR Proteomes; UP000406392; Unassembled WGS sequence.
DR Proteomes; UP000430081; Unassembled WGS sequence.
DR Proteomes; UP000430387; Unassembled WGS sequence.
DR Proteomes; UP000435694; Unassembled WGS sequence.
DR Proteomes; UP000436141; Unassembled WGS sequence.
DR Proteomes; UP000436482; Unassembled WGS sequence.
DR Proteomes; UP000437875; Unassembled WGS sequence.
DR Proteomes; UP000438259; Unassembled WGS sequence.
DR Proteomes; UP000438913; Unassembled WGS sequence.
DR Proteomes; UP000438958; Unassembled WGS sequence.
DR Proteomes; UP000447081; Unassembled WGS sequence.
DR Proteomes; UP000460351; Unassembled WGS sequence.
DR Proteomes; UP000460654; Unassembled WGS sequence.
DR Proteomes; UP000460875; Unassembled WGS sequence.
DR Proteomes; UP000462271; Unassembled WGS sequence.
DR Proteomes; UP000464359; Chromosome.
DR Proteomes; UP000469708; Unassembled WGS sequence.
DR Proteomes; UP000470386; Unassembled WGS sequence.
DR Proteomes; UP000471360; Unassembled WGS sequence.
DR Proteomes; UP000471490; Unassembled WGS sequence.
DR Proteomes; UP000472856; Unassembled WGS sequence.
DR Proteomes; UP000475070; Unassembled WGS sequence.
DR Proteomes; UP000480485; Unassembled WGS sequence.
DR Proteomes; UP000486847; Unassembled WGS sequence.
DR Proteomes; UP000487258; Unassembled WGS sequence.
DR Proteomes; UP000509260; Chromosome.
DR Proteomes; UP000509457; Chromosome.
DR Proteomes; UP000509796; Chromosome.
DR Proteomes; UP000512171; Chromosome.
DR Proteomes; UP000512182; Chromosome.
DR Proteomes; UP000512230; Chromosome.
DR Proteomes; UP000512322; Chromosome.
DR Proteomes; UP000514533; Chromosome.
DR Proteomes; UP000514715; Chromosome.
DR Proteomes; UP000514754; Chromosome.
DR Proteomes; UP000517067; Unassembled WGS sequence.
DR Proteomes; UP000518092; Unassembled WGS sequence.
DR Proteomes; UP000519182; Unassembled WGS sequence.
DR Proteomes; UP000519859; Unassembled WGS sequence.
DR Proteomes; UP000521991; Unassembled WGS sequence.
DR Proteomes; UP000521994; Unassembled WGS sequence.
DR Proteomes; UP000523197; Unassembled WGS sequence.
DR Proteomes; UP000523388; Unassembled WGS sequence.
DR Proteomes; UP000523924; Unassembled WGS sequence.
DR Proteomes; UP000524010; Unassembled WGS sequence.
DR Proteomes; UP000528504; Unassembled WGS sequence.
DR Proteomes; UP000530628; Unassembled WGS sequence.
DR Proteomes; UP000531463; Unassembled WGS sequence.
DR Proteomes; UP000531761; Unassembled WGS sequence.
DR Proteomes; UP000531813; Unassembled WGS sequence.
DR Proteomes; UP000531916; Unassembled WGS sequence.
DR Proteomes; UP000531962; Unassembled WGS sequence.
DR Proteomes; UP000532204; Unassembled WGS sequence.
DR Proteomes; UP000533284; Unassembled WGS sequence.
DR Proteomes; UP000533482; Unassembled WGS sequence.
DR Proteomes; UP000534496; Unassembled WGS sequence.
DR Proteomes; UP000535531; Unassembled WGS sequence.
DR Proteomes; UP000537181; Unassembled WGS sequence.
DR Proteomes; UP000538406; Unassembled WGS sequence.
DR Proteomes; UP000539823; Unassembled WGS sequence.
DR Proteomes; UP000540085; Unassembled WGS sequence.
DR Proteomes; UP000540485; Unassembled WGS sequence.
DR Proteomes; UP000542214; Unassembled WGS sequence.
DR Proteomes; UP000543240; Unassembled WGS sequence.
DR Proteomes; UP000543252; Unassembled WGS sequence.
DR Proteomes; UP000543257; Unassembled WGS sequence.
DR Proteomes; UP000543424; Unassembled WGS sequence.
DR Proteomes; UP000555763; Unassembled WGS sequence.
DR Proteomes; UP000560466; Unassembled WGS sequence.
DR Proteomes; UP000562666; Unassembled WGS sequence.
DR Proteomes; UP000562788; Unassembled WGS sequence.
DR Proteomes; UP000567387; Unassembled WGS sequence.
DR Proteomes; UP000572731; Unassembled WGS sequence.
DR Proteomes; UP000579110; Unassembled WGS sequence.
DR Proteomes; UP000581425; Chromosome.
DR Proteomes; UP000585348; Unassembled WGS sequence.
DR Proteomes; UP000587626; Unassembled WGS sequence.
DR Proteomes; UP000591371; Unassembled WGS sequence.
DR Proteomes; UP000594840; Chromosome.
DR Proteomes; UP000594864; Chromosome.
DR Proteomes; UP000600030; Unassembled WGS sequence.
DR Proteomes; UP000602649; Unassembled WGS sequence.
DR Proteomes; UP000611240; Unassembled WGS sequence.
DR Proteomes; UP000612270; Unassembled WGS sequence.
DR Proteomes; UP000622722; Unassembled WGS sequence.
DR Proteomes; UP000630371; Unassembled WGS sequence.
DR Proteomes; UP000647581; Unassembled WGS sequence.
DR Proteomes; UP000663166; Chromosome.
DR Proteomes; UP000701764; Unassembled WGS sequence.
DR Proteomes; UP000702781; Unassembled WGS sequence.
DR Proteomes; UP000729274; Unassembled WGS sequence.
DR Proteomes; UP000730526; Unassembled WGS sequence.
DR Proteomes; UP000739847; Unassembled WGS sequence.
DR Proteomes; UP000753065; Unassembled WGS sequence.
DR Proteomes; UP000754717; Unassembled WGS sequence.
DR Proteomes; UP000759070; Unassembled WGS sequence.
DR Proteomes; UP000775646; Unassembled WGS sequence.
DR Proteomes; UP000779652; Unassembled WGS sequence.
DR Proteomes; UP000784110; Unassembled WGS sequence.
DR Proteomes; UP000813224; Unassembled WGS sequence.
DR Proteomes; UP000840371; Unassembled WGS sequence.
DR Proteomes; UP000843571; Unassembled WGS sequence.
DR Proteomes; UP000844228; Unassembled WGS sequence.
DR Proteomes; UP000845800; Unassembled WGS sequence.
DR Proteomes; UP000846355; Unassembled WGS sequence.
DR Proteomes; UP000852798; Unassembled WGS sequence.
DR Proteomes; UP000859922; Unassembled WGS sequence.
DR Proteomes; UP000870292; Unassembled WGS sequence.
DR Proteomes; UP000872889; Unassembled WGS sequence.
DR Proteomes; UP000885382; Unassembled WGS sequence.
DR Proteomes; UP001082551; Unassembled WGS sequence.
DR Proteomes; UP001159453; Unassembled WGS sequence.
DR Proteomes; UP001173742; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:UniProtKB-UniRule.
DR CDD; cd06928; RNAP_alpha_NTD; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00059; RNApol_bact_RpoA; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR011773; DNA-dir_RpoA.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR011260; RNAP_asu_C.
DR InterPro; IPR036643; RNApol_insert_sf.
DR NCBIfam; TIGR02027; rpoA; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF03118; RNA_pol_A_CTD; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF47789; C-terminal domain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|HAMAP-Rule:MF_00059};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695, ECO:0000256|HAMAP-
KW Rule:MF_00059};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00059};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|HAMAP-
KW Rule:MF_00059}.
FT DOMAIN 23..234
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
FT REGION 1..235
FT /note="Alpha N-terminal domain (alpha-NTD)"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00059"
FT REGION 249..329
FT /note="Alpha C-terminal domain (alpha-CTD)"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00059"
SQ SEQUENCE 329 AA; 36512 MW; 12A14B75A3CAEA19 CRC64;
MQGSVTEFLK PRLVDIEQVS STHAKVTLEP LERGFGHTLG NALRRILLSS MPGCAVTEVE
IDGVLHEYST KEGVQEDILE ILLNLKGLAV RVQGKDEVIL TLNKSGIGPV TAADITHDGD
VEIVKPQHVI CHLTDENASI SMRIKVQRGR GYVPASTRIH SEEDERPIGR LLVDACYSPV
ERIAYNVEAA RVEQRTDLDK LVIEMETNGT IDPEEAIRRA ATILAEQLEA FVDLRDVRQP
EVKEEKPEFD PILLRPVDDL ELTVRSANCL KAEAIHYIGD LVQRTEVELL KTPNLGKKSL
TEIKDVLASR GLSLGMRLEN WPPASIADE
//
