ID C3XSH6_BRAFL Unreviewed; 234 AA.
AC C3XSH6;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=MAM domain-containing protein {ECO:0000259|PROSITE:PS50060};
DE Flags: Fragment;
GN ORFNames=BRAFLDRAFT_156861 {ECO:0000313|EMBL:EEN68897.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739;
RN [1] {ECO:0000313|EMBL:EEN68897.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN68897.1};
RC TISSUE=Testes {ECO:0000313|EMBL:EEN68897.1};
RX PubMed=18563158; DOI=10.1038/nature06967;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA Satoh N., Rokhsar D.S.;
RT "The amphioxus genome and the evolution of the chordate karyotype.";
RL Nature 453:1064-1071(2008).
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00124}.
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DR EMBL; GG666459; EEN68897.1; -; Genomic_DNA.
DR RefSeq; XP_002612888.1; XM_002612842.1.
DR AlphaFoldDB; C3XSH6; -.
DR eggNOG; KOG1095; Eukaryota.
DR InParanoid; C3XSH6; -.
DR GO; GO:0016020; C:membrane; IEA:InterPro.
DR CDD; cd00112; LDLa; 1.
DR CDD; cd06263; MAM; 2.
DR Gene3D; 2.60.120.200; -; 2.
DR Gene3D; 4.10.400.10; Low-density Lipoprotein Receptor; 1.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR036055; LDL_receptor-like_sf.
DR InterPro; IPR023415; LDLR_class-A_CS.
DR InterPro; IPR002172; LDrepeatLR_classA_rpt.
DR InterPro; IPR000998; MAM_dom.
DR PANTHER; PTHR23282; APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR; 1.
DR PANTHER; PTHR23282:SF101; RT07201P-RELATED; 1.
DR Pfam; PF00057; Ldl_recept_a; 1.
DR Pfam; PF00629; MAM; 2.
DR SMART; SM00192; LDLa; 1.
DR SMART; SM00137; MAM; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 2.
DR SUPFAM; SSF57424; LDL receptor-like module; 1.
DR PROSITE; PS01209; LDLRA_1; 1.
DR PROSITE; PS50068; LDLRA_2; 1.
DR PROSITE; PS50060; MAM_2; 2.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157}.
FT DOMAIN 1..113
FT /note="MAM"
FT /evidence="ECO:0000259|PROSITE:PS50060"
FT DOMAIN 164..234
FT /note="MAM"
FT /evidence="ECO:0000259|PROSITE:PS50060"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EEN68897.1"
FT NON_TER 234
FT /evidence="ECO:0000313|EMBL:EEN68897.1"
SQ SEQUENCE 234 AA; 26110 MW; 40FB8C4C18B5D16F CRC64;
GFYMYVDASS GNVYSFATLT SPMLQQASST CELTFWYHMY GQDIGSLQVV RQQGTMQATL
WELSGDQGNV WQQAVVSVGR VNTPFQLLLQ ARRGFNHLGD VAIDDVSFQG CALPELRPCQ
MQEFFCVQSG DCVNWTKICD YAQDCRDGSD EADWVCDSSA YPYERCDMEA DICSWTQELD
DDFDWSRRSG STSSFNTGPA VDHTKGDTSG YYIFIEASSP RQPGDVARIS SPVI
//
